Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14903 | 44932;44933;44934 | chr2:178624573;178624572;178624571 | chr2:179489300;179489299;179489298 |
N2AB | 13262 | 40009;40010;40011 | chr2:178624573;178624572;178624571 | chr2:179489300;179489299;179489298 |
N2A | 12335 | 37228;37229;37230 | chr2:178624573;178624572;178624571 | chr2:179489300;179489299;179489298 |
N2B | 5838 | 17737;17738;17739 | chr2:178624573;178624572;178624571 | chr2:179489300;179489299;179489298 |
Novex-1 | 5963 | 18112;18113;18114 | chr2:178624573;178624572;178624571 | chr2:179489300;179489299;179489298 |
Novex-2 | 6030 | 18313;18314;18315 | chr2:178624573;178624572;178624571 | chr2:179489300;179489299;179489298 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | None | None | 1.0 | D | 0.74 | 0.456 | 0.75049894695 | gnomAD-4.0.0 | 1.59344E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2246 | likely_benign | 0.1599 | benign | -0.123 | Destabilizing | 0.977 | D | 0.601 | neutral | D | 0.551837373 | None | None | N |
D/C | 0.752 | likely_pathogenic | 0.709 | pathogenic | 0.074 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
D/E | 0.1763 | likely_benign | 0.129 | benign | -0.259 | Destabilizing | 0.117 | N | 0.261 | neutral | N | 0.467020121 | None | None | N |
D/F | 0.7071 | likely_pathogenic | 0.6346 | pathogenic | -0.143 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
D/G | 0.2699 | likely_benign | 0.2227 | benign | -0.294 | Destabilizing | 0.977 | D | 0.594 | neutral | D | 0.534892106 | None | None | N |
D/H | 0.3894 | ambiguous | 0.3192 | benign | 0.116 | Stabilizing | 0.999 | D | 0.683 | prob.neutral | D | 0.565116809 | None | None | N |
D/I | 0.4382 | ambiguous | 0.3527 | ambiguous | 0.269 | Stabilizing | 0.998 | D | 0.749 | deleterious | None | None | None | None | N |
D/K | 0.3865 | ambiguous | 0.3331 | benign | 0.436 | Stabilizing | 0.99 | D | 0.625 | neutral | None | None | None | None | N |
D/L | 0.5181 | ambiguous | 0.4322 | ambiguous | 0.269 | Stabilizing | 0.995 | D | 0.726 | prob.delet. | None | None | None | None | N |
D/M | 0.7284 | likely_pathogenic | 0.6529 | pathogenic | 0.299 | Stabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
D/N | 0.131 | likely_benign | 0.1038 | benign | 0.173 | Stabilizing | 0.993 | D | 0.601 | neutral | N | 0.510168819 | None | None | N |
D/P | 0.8945 | likely_pathogenic | 0.8904 | pathogenic | 0.16 | Stabilizing | 0.998 | D | 0.651 | neutral | None | None | None | None | N |
D/Q | 0.3947 | ambiguous | 0.3132 | benign | 0.193 | Stabilizing | 0.99 | D | 0.655 | neutral | None | None | None | None | N |
D/R | 0.4641 | ambiguous | 0.4149 | ambiguous | 0.59 | Stabilizing | 0.995 | D | 0.691 | prob.neutral | None | None | None | None | N |
D/S | 0.1599 | likely_benign | 0.125 | benign | 0.076 | Stabilizing | 0.983 | D | 0.559 | neutral | None | None | None | None | N |
D/T | 0.303 | likely_benign | 0.2491 | benign | 0.208 | Stabilizing | 0.995 | D | 0.633 | neutral | None | None | None | None | N |
D/V | 0.2475 | likely_benign | 0.1889 | benign | 0.16 | Stabilizing | 0.997 | D | 0.722 | prob.delet. | D | 0.536602571 | None | None | N |
D/W | 0.9152 | likely_pathogenic | 0.9005 | pathogenic | -0.056 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
D/Y | 0.3268 | likely_benign | 0.2729 | benign | 0.09 | Stabilizing | 1.0 | D | 0.74 | deleterious | D | 0.665026455 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.