Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14913 | 44962;44963;44964 | chr2:178624543;178624542;178624541 | chr2:179489270;179489269;179489268 |
N2AB | 13272 | 40039;40040;40041 | chr2:178624543;178624542;178624541 | chr2:179489270;179489269;179489268 |
N2A | 12345 | 37258;37259;37260 | chr2:178624543;178624542;178624541 | chr2:179489270;179489269;179489268 |
N2B | 5848 | 17767;17768;17769 | chr2:178624543;178624542;178624541 | chr2:179489270;179489269;179489268 |
Novex-1 | 5973 | 18142;18143;18144 | chr2:178624543;178624542;178624541 | chr2:179489270;179489269;179489268 |
Novex-2 | 6040 | 18343;18344;18345 | chr2:178624543;178624542;178624541 | chr2:179489270;179489269;179489268 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | None | N | 0.125 | 0.069 | 0.0138822411134 | gnomAD-4.0.0 | 6.16141E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09877E-06 | 0 | 0 |
D/N | None | None | None | N | 0.243 | 0.128 | 0.0482279557977 | gnomAD-4.0.0 | 3.18682E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72452E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.17 | likely_benign | 0.1538 | benign | -0.204 | Destabilizing | 0.027 | N | 0.324 | neutral | N | 0.325315128 | None | None | N |
D/C | 0.4991 | ambiguous | 0.4426 | ambiguous | 0.332 | Stabilizing | 0.935 | D | 0.483 | neutral | None | None | None | None | N |
D/E | 0.1864 | likely_benign | 0.1824 | benign | -0.292 | Destabilizing | 0.002 | N | 0.215 | neutral | N | 0.344406562 | None | None | N |
D/F | 0.6311 | likely_pathogenic | 0.5754 | pathogenic | -0.491 | Destabilizing | 0.791 | D | 0.443 | neutral | None | None | None | None | N |
D/G | 0.078 | likely_benign | 0.0713 | benign | -0.379 | Destabilizing | None | N | 0.125 | neutral | N | 0.3440864 | None | None | N |
D/H | 0.2734 | likely_benign | 0.2346 | benign | -0.571 | Destabilizing | 0.317 | N | 0.352 | neutral | N | 0.314247692 | None | None | N |
D/I | 0.5201 | ambiguous | 0.4517 | ambiguous | 0.197 | Stabilizing | 0.555 | D | 0.456 | neutral | None | None | None | None | N |
D/K | 0.3313 | likely_benign | 0.319 | benign | 0.356 | Stabilizing | 0.081 | N | 0.295 | neutral | None | None | None | None | N |
D/L | 0.4371 | ambiguous | 0.3953 | ambiguous | 0.197 | Stabilizing | 0.38 | N | 0.428 | neutral | None | None | None | None | N |
D/M | 0.7065 | likely_pathogenic | 0.6875 | pathogenic | 0.554 | Stabilizing | 0.935 | D | 0.44 | neutral | None | None | None | None | N |
D/N | 0.0964 | likely_benign | 0.0941 | benign | 0.238 | Stabilizing | None | N | 0.243 | neutral | N | 0.345251468 | None | None | N |
D/P | 0.848 | likely_pathogenic | 0.83 | pathogenic | 0.085 | Stabilizing | 0.555 | D | 0.347 | neutral | None | None | None | None | N |
D/Q | 0.3098 | likely_benign | 0.2931 | benign | 0.239 | Stabilizing | 0.38 | N | 0.329 | neutral | None | None | None | None | N |
D/R | 0.325 | likely_benign | 0.279 | benign | 0.316 | Stabilizing | 0.38 | N | 0.407 | neutral | None | None | None | None | N |
D/S | 0.1045 | likely_benign | 0.0977 | benign | 0.117 | Stabilizing | 0.035 | N | 0.252 | neutral | None | None | None | None | N |
D/T | 0.2873 | likely_benign | 0.2659 | benign | 0.244 | Stabilizing | 0.081 | N | 0.351 | neutral | None | None | None | None | N |
D/V | 0.3738 | ambiguous | 0.3194 | benign | 0.085 | Stabilizing | 0.484 | N | 0.427 | neutral | N | 0.401461749 | None | None | N |
D/W | 0.83 | likely_pathogenic | 0.8061 | pathogenic | -0.482 | Destabilizing | 0.935 | D | 0.56 | neutral | None | None | None | None | N |
D/Y | 0.2359 | likely_benign | 0.1843 | benign | -0.288 | Destabilizing | 0.741 | D | 0.441 | neutral | N | 0.383502526 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.