Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14916 | 44971;44972;44973 | chr2:178624534;178624533;178624532 | chr2:179489261;179489260;179489259 |
N2AB | 13275 | 40048;40049;40050 | chr2:178624534;178624533;178624532 | chr2:179489261;179489260;179489259 |
N2A | 12348 | 37267;37268;37269 | chr2:178624534;178624533;178624532 | chr2:179489261;179489260;179489259 |
N2B | 5851 | 17776;17777;17778 | chr2:178624534;178624533;178624532 | chr2:179489261;179489260;179489259 |
Novex-1 | 5976 | 18151;18152;18153 | chr2:178624534;178624533;178624532 | chr2:179489261;179489260;179489259 |
Novex-2 | 6043 | 18352;18353;18354 | chr2:178624534;178624533;178624532 | chr2:179489261;179489260;179489259 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.002 | N | 0.236 | 0.138 | 0.261217442401 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
P/S | rs2058747129 | None | 0.891 | N | 0.309 | 0.182 | 0.117506650769 | gnomAD-4.0.0 | 3.18692E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72485E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0731 | likely_benign | 0.0779 | benign | -0.76 | Destabilizing | 0.625 | D | 0.282 | neutral | N | 0.346510809 | None | None | N |
P/C | 0.6402 | likely_pathogenic | 0.6589 | pathogenic | -0.615 | Destabilizing | 0.998 | D | 0.367 | neutral | None | None | None | None | N |
P/D | 0.3582 | ambiguous | 0.4516 | ambiguous | -0.737 | Destabilizing | 0.991 | D | 0.277 | neutral | None | None | None | None | N |
P/E | 0.2023 | likely_benign | 0.2446 | benign | -0.844 | Destabilizing | 0.974 | D | 0.278 | neutral | None | None | None | None | N |
P/F | 0.5061 | ambiguous | 0.4799 | ambiguous | -0.895 | Destabilizing | 0.949 | D | 0.385 | neutral | None | None | None | None | N |
P/G | 0.2785 | likely_benign | 0.3427 | ambiguous | -0.925 | Destabilizing | 0.915 | D | 0.343 | neutral | None | None | None | None | N |
P/H | 0.2075 | likely_benign | 0.2072 | benign | -0.462 | Destabilizing | 0.998 | D | 0.345 | neutral | None | None | None | None | N |
P/I | 0.263 | likely_benign | 0.2345 | benign | -0.462 | Destabilizing | 0.728 | D | 0.357 | neutral | None | None | None | None | N |
P/K | 0.1979 | likely_benign | 0.2494 | benign | -0.724 | Destabilizing | 0.915 | D | 0.29 | neutral | None | None | None | None | N |
P/L | 0.1007 | likely_benign | 0.0792 | benign | -0.462 | Destabilizing | 0.002 | N | 0.236 | neutral | N | 0.343232486 | None | None | N |
P/M | 0.2675 | likely_benign | 0.2437 | benign | -0.395 | Destabilizing | 0.325 | N | 0.285 | neutral | None | None | None | None | N |
P/N | 0.3023 | likely_benign | 0.3519 | ambiguous | -0.397 | Destabilizing | 0.991 | D | 0.359 | neutral | None | None | None | None | N |
P/Q | 0.1354 | likely_benign | 0.1469 | benign | -0.679 | Destabilizing | 0.966 | D | 0.273 | neutral | N | 0.342038696 | None | None | N |
P/R | 0.1448 | likely_benign | 0.1602 | benign | -0.108 | Destabilizing | 0.966 | D | 0.361 | neutral | N | 0.338262325 | None | None | N |
P/S | 0.1177 | likely_benign | 0.1291 | benign | -0.737 | Destabilizing | 0.891 | D | 0.309 | neutral | N | 0.350937601 | None | None | N |
P/T | 0.104 | likely_benign | 0.098 | benign | -0.749 | Destabilizing | 0.801 | D | 0.297 | neutral | N | 0.342140622 | None | None | N |
P/V | 0.1794 | likely_benign | 0.1692 | benign | -0.527 | Destabilizing | 0.525 | D | 0.287 | neutral | None | None | None | None | N |
P/W | 0.6411 | likely_pathogenic | 0.6228 | pathogenic | -0.973 | Destabilizing | 0.998 | D | 0.402 | neutral | None | None | None | None | N |
P/Y | 0.4642 | ambiguous | 0.4663 | ambiguous | -0.698 | Destabilizing | 0.974 | D | 0.371 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.