Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14917 | 44974;44975;44976 | chr2:178624531;178624530;178624529 | chr2:179489258;179489257;179489256 |
N2AB | 13276 | 40051;40052;40053 | chr2:178624531;178624530;178624529 | chr2:179489258;179489257;179489256 |
N2A | 12349 | 37270;37271;37272 | chr2:178624531;178624530;178624529 | chr2:179489258;179489257;179489256 |
N2B | 5852 | 17779;17780;17781 | chr2:178624531;178624530;178624529 | chr2:179489258;179489257;179489256 |
Novex-1 | 5977 | 18154;18155;18156 | chr2:178624531;178624530;178624529 | chr2:179489258;179489257;179489256 |
Novex-2 | 6044 | 18355;18356;18357 | chr2:178624531;178624530;178624529 | chr2:179489258;179489257;179489256 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.822 | N | 0.483 | 0.243 | 0.20549828249 | gnomAD-4.0.0 | 4.79232E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29927E-06 | 0 | 0 |
E/K | None | None | 0.822 | N | 0.467 | 0.293 | 0.191931220699 | gnomAD-4.0.0 | 2.05386E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87329E-05 | 0 | 1.79978E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1618 | likely_benign | 0.1541 | benign | -0.299 | Destabilizing | 0.822 | D | 0.473 | neutral | N | 0.346214157 | None | None | N |
E/C | 0.9211 | likely_pathogenic | 0.9254 | pathogenic | -0.059 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/D | 0.1195 | likely_benign | 0.096 | benign | -0.251 | Destabilizing | 0.002 | N | 0.169 | neutral | N | 0.34444924 | None | None | N |
E/F | 0.8215 | likely_pathogenic | 0.8297 | pathogenic | -0.248 | Destabilizing | 0.993 | D | 0.62 | neutral | None | None | None | None | N |
E/G | 0.1834 | likely_benign | 0.1521 | benign | -0.474 | Destabilizing | 0.822 | D | 0.483 | neutral | N | 0.331881853 | None | None | N |
E/H | 0.5753 | likely_pathogenic | 0.5628 | ambiguous | 0.082 | Stabilizing | 0.993 | D | 0.411 | neutral | None | None | None | None | N |
E/I | 0.5727 | likely_pathogenic | 0.548 | ambiguous | 0.121 | Stabilizing | 0.978 | D | 0.613 | neutral | None | None | None | None | N |
E/K | 0.1821 | likely_benign | 0.1733 | benign | 0.294 | Stabilizing | 0.822 | D | 0.467 | neutral | N | 0.323734882 | None | None | N |
E/L | 0.5446 | ambiguous | 0.5216 | ambiguous | 0.121 | Stabilizing | 0.978 | D | 0.593 | neutral | None | None | None | None | N |
E/M | 0.6025 | likely_pathogenic | 0.6013 | pathogenic | 0.15 | Stabilizing | 0.998 | D | 0.585 | neutral | None | None | None | None | N |
E/N | 0.3152 | likely_benign | 0.2724 | benign | 0.065 | Stabilizing | 0.754 | D | 0.433 | neutral | None | None | None | None | N |
E/P | 0.8095 | likely_pathogenic | 0.8274 | pathogenic | 0.001 | Stabilizing | 0.978 | D | 0.436 | neutral | None | None | None | None | N |
E/Q | 0.2052 | likely_benign | 0.1876 | benign | 0.092 | Stabilizing | 0.904 | D | 0.408 | neutral | N | 0.335468128 | None | None | N |
E/R | 0.3111 | likely_benign | 0.3117 | benign | 0.518 | Stabilizing | 0.978 | D | 0.409 | neutral | None | None | None | None | N |
E/S | 0.235 | likely_benign | 0.2056 | benign | -0.117 | Destabilizing | 0.86 | D | 0.45 | neutral | None | None | None | None | N |
E/T | 0.3057 | likely_benign | 0.2935 | benign | 0.024 | Stabilizing | 0.86 | D | 0.442 | neutral | None | None | None | None | N |
E/V | 0.3594 | ambiguous | 0.3415 | ambiguous | 0.001 | Stabilizing | 0.97 | D | 0.497 | neutral | N | 0.38665426 | None | None | N |
E/W | 0.9087 | likely_pathogenic | 0.9136 | pathogenic | -0.135 | Destabilizing | 0.998 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/Y | 0.7056 | likely_pathogenic | 0.7147 | pathogenic | -0.017 | Destabilizing | 0.993 | D | 0.579 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.