Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14921 | 44986;44987;44988 | chr2:178624519;178624518;178624517 | chr2:179489246;179489245;179489244 |
N2AB | 13280 | 40063;40064;40065 | chr2:178624519;178624518;178624517 | chr2:179489246;179489245;179489244 |
N2A | 12353 | 37282;37283;37284 | chr2:178624519;178624518;178624517 | chr2:179489246;179489245;179489244 |
N2B | 5856 | 17791;17792;17793 | chr2:178624519;178624518;178624517 | chr2:179489246;179489245;179489244 |
Novex-1 | 5981 | 18166;18167;18168 | chr2:178624519;178624518;178624517 | chr2:179489246;179489245;179489244 |
Novex-2 | 6048 | 18367;18368;18369 | chr2:178624519;178624518;178624517 | chr2:179489246;179489245;179489244 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs776808932 | None | 0.627 | N | 0.537 | 0.287 | 0.295974979623 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
T/I | rs776808932 | None | 0.627 | N | 0.537 | 0.287 | 0.295974979623 | gnomAD-4.0.0 | 2.73851E-06 | None | None | None | None | N | None | 2.99401E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99909E-07 | 2.31959E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1264 | likely_benign | 0.1067 | benign | -1.043 | Destabilizing | 0.001 | N | 0.207 | neutral | N | 0.508332558 | None | None | N |
T/C | 0.6727 | likely_pathogenic | 0.6261 | pathogenic | -0.736 | Destabilizing | 0.944 | D | 0.511 | neutral | None | None | None | None | N |
T/D | 0.4871 | ambiguous | 0.4649 | ambiguous | -1.027 | Destabilizing | 0.241 | N | 0.51 | neutral | None | None | None | None | N |
T/E | 0.3125 | likely_benign | 0.3311 | benign | -0.998 | Destabilizing | 0.241 | N | 0.481 | neutral | None | None | None | None | N |
T/F | 0.4543 | ambiguous | 0.3908 | ambiguous | -1.186 | Destabilizing | 0.818 | D | 0.578 | neutral | None | None | None | None | N |
T/G | 0.4147 | ambiguous | 0.3773 | ambiguous | -1.321 | Destabilizing | 0.241 | N | 0.53 | neutral | None | None | None | None | N |
T/H | 0.3703 | ambiguous | 0.3774 | ambiguous | -1.678 | Destabilizing | 0.818 | D | 0.567 | neutral | None | None | None | None | N |
T/I | 0.1868 | likely_benign | 0.1962 | benign | -0.379 | Destabilizing | 0.627 | D | 0.537 | neutral | N | 0.501928201 | None | None | N |
T/K | 0.1573 | likely_benign | 0.2774 | benign | -0.898 | Destabilizing | 0.001 | N | 0.292 | neutral | N | 0.492753553 | None | None | N |
T/L | 0.159 | likely_benign | 0.1356 | benign | -0.379 | Destabilizing | 0.241 | N | 0.496 | neutral | None | None | None | None | N |
T/M | 0.1093 | likely_benign | 0.0934 | benign | 0.083 | Stabilizing | 0.981 | D | 0.506 | neutral | None | None | None | None | N |
T/N | 0.1719 | likely_benign | 0.1348 | benign | -1.047 | Destabilizing | 0.019 | N | 0.252 | neutral | None | None | None | None | N |
T/P | 0.1837 | likely_benign | 0.1801 | benign | -0.569 | Destabilizing | 0.773 | D | 0.537 | neutral | D | 0.548472214 | None | None | N |
T/Q | 0.2084 | likely_benign | 0.2657 | benign | -1.23 | Destabilizing | 0.527 | D | 0.533 | neutral | None | None | None | None | N |
T/R | 0.1836 | likely_benign | 0.2377 | benign | -0.666 | Destabilizing | 0.003 | N | 0.287 | neutral | N | 0.506813916 | None | None | N |
T/S | 0.2166 | likely_benign | 0.1667 | benign | -1.252 | Destabilizing | 0.09 | N | 0.523 | neutral | N | 0.507714891 | None | None | N |
T/V | 0.1928 | likely_benign | 0.1772 | benign | -0.569 | Destabilizing | 0.241 | N | 0.447 | neutral | None | None | None | None | N |
T/W | 0.7052 | likely_pathogenic | 0.7185 | pathogenic | -1.14 | Destabilizing | 0.981 | D | 0.606 | neutral | None | None | None | None | N |
T/Y | 0.4302 | ambiguous | 0.3799 | ambiguous | -0.873 | Destabilizing | 0.818 | D | 0.578 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.