Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14922 | 44989;44990;44991 | chr2:178624516;178624515;178624514 | chr2:179489243;179489242;179489241 |
N2AB | 13281 | 40066;40067;40068 | chr2:178624516;178624515;178624514 | chr2:179489243;179489242;179489241 |
N2A | 12354 | 37285;37286;37287 | chr2:178624516;178624515;178624514 | chr2:179489243;179489242;179489241 |
N2B | 5857 | 17794;17795;17796 | chr2:178624516;178624515;178624514 | chr2:179489243;179489242;179489241 |
Novex-1 | 5982 | 18169;18170;18171 | chr2:178624516;178624515;178624514 | chr2:179489243;179489242;179489241 |
Novex-2 | 6049 | 18370;18371;18372 | chr2:178624516;178624515;178624514 | chr2:179489243;179489242;179489241 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/D | rs1576599425 | None | 1.0 | D | 0.887 | 0.65 | 0.372268306217 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94477E-04 | None | 0 | 0 | 0 | 0 | 0 |
Y/H | None | None | 1.0 | D | 0.807 | 0.576 | 0.362960570912 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9949 | likely_pathogenic | 0.9953 | pathogenic | -2.728 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Y/C | 0.9562 | likely_pathogenic | 0.9547 | pathogenic | -2.094 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.680844841 | None | None | N |
Y/D | 0.9964 | likely_pathogenic | 0.998 | pathogenic | -3.563 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.680844841 | None | None | N |
Y/E | 0.9987 | likely_pathogenic | 0.9992 | pathogenic | -3.321 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
Y/F | 0.2693 | likely_benign | 0.3135 | benign | -1.12 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | N | 0.496771749 | None | None | N |
Y/G | 0.9913 | likely_pathogenic | 0.9926 | pathogenic | -3.181 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
Y/H | 0.9799 | likely_pathogenic | 0.9849 | pathogenic | -2.429 | Highly Destabilizing | 1.0 | D | 0.807 | deleterious | D | 0.680844841 | None | None | N |
Y/I | 0.94 | likely_pathogenic | 0.9499 | pathogenic | -1.217 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Y/K | 0.9987 | likely_pathogenic | 0.9992 | pathogenic | -2.458 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
Y/L | 0.9031 | likely_pathogenic | 0.903 | pathogenic | -1.217 | Destabilizing | 0.999 | D | 0.776 | deleterious | None | None | None | None | N |
Y/M | 0.9817 | likely_pathogenic | 0.9834 | pathogenic | -1.233 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
Y/N | 0.9848 | likely_pathogenic | 0.9875 | pathogenic | -3.451 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.680844841 | None | None | N |
Y/P | 0.998 | likely_pathogenic | 0.9982 | pathogenic | -1.739 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
Y/Q | 0.9986 | likely_pathogenic | 0.999 | pathogenic | -3.011 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
Y/R | 0.9946 | likely_pathogenic | 0.9961 | pathogenic | -2.598 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Y/S | 0.9868 | likely_pathogenic | 0.9878 | pathogenic | -3.713 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | D | 0.680844841 | None | None | N |
Y/T | 0.9948 | likely_pathogenic | 0.9954 | pathogenic | -3.324 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
Y/V | 0.9046 | likely_pathogenic | 0.9057 | pathogenic | -1.739 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Y/W | 0.8179 | likely_pathogenic | 0.8105 | pathogenic | -0.523 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.