Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14926 | 45001;45002;45003 | chr2:178624504;178624503;178624502 | chr2:179489231;179489230;179489229 |
N2AB | 13285 | 40078;40079;40080 | chr2:178624504;178624503;178624502 | chr2:179489231;179489230;179489229 |
N2A | 12358 | 37297;37298;37299 | chr2:178624504;178624503;178624502 | chr2:179489231;179489230;179489229 |
N2B | 5861 | 17806;17807;17808 | chr2:178624504;178624503;178624502 | chr2:179489231;179489230;179489229 |
Novex-1 | 5986 | 18181;18182;18183 | chr2:178624504;178624503;178624502 | chr2:179489231;179489230;179489229 |
Novex-2 | 6053 | 18382;18383;18384 | chr2:178624504;178624503;178624502 | chr2:179489231;179489230;179489229 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.998 | D | 0.685 | 0.592 | 0.540334051544 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7397 | likely_pathogenic | 0.7857 | pathogenic | -1.004 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
A/D | 0.8918 | likely_pathogenic | 0.9362 | pathogenic | -2.024 | Highly Destabilizing | 0.999 | D | 0.859 | deleterious | D | 0.803380118 | None | None | N |
A/E | 0.8908 | likely_pathogenic | 0.9354 | pathogenic | -1.943 | Destabilizing | 0.999 | D | 0.816 | deleterious | None | None | None | None | N |
A/F | 0.823 | likely_pathogenic | 0.8914 | pathogenic | -0.874 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
A/G | 0.3452 | ambiguous | 0.4136 | ambiguous | -1.479 | Destabilizing | 0.996 | D | 0.613 | neutral | D | 0.677009998 | None | None | N |
A/H | 0.9281 | likely_pathogenic | 0.9489 | pathogenic | -1.854 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
A/I | 0.7062 | likely_pathogenic | 0.8067 | pathogenic | -0.181 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
A/K | 0.9531 | likely_pathogenic | 0.9777 | pathogenic | -1.397 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
A/L | 0.5883 | likely_pathogenic | 0.6964 | pathogenic | -0.181 | Destabilizing | 0.998 | D | 0.746 | deleterious | None | None | None | None | N |
A/M | 0.7272 | likely_pathogenic | 0.797 | pathogenic | -0.195 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
A/N | 0.8536 | likely_pathogenic | 0.8838 | pathogenic | -1.332 | Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
A/P | 0.9436 | likely_pathogenic | 0.9695 | pathogenic | -0.447 | Destabilizing | 0.999 | D | 0.853 | deleterious | D | 0.688465899 | None | None | N |
A/Q | 0.8774 | likely_pathogenic | 0.9217 | pathogenic | -1.332 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
A/R | 0.8741 | likely_pathogenic | 0.9275 | pathogenic | -1.239 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
A/S | 0.2217 | likely_benign | 0.2085 | benign | -1.692 | Destabilizing | 0.957 | D | 0.373 | neutral | D | 0.623861126 | None | None | N |
A/T | 0.3149 | likely_benign | 0.2845 | benign | -1.514 | Destabilizing | 0.992 | D | 0.631 | neutral | D | 0.548730219 | None | None | N |
A/V | 0.4228 | ambiguous | 0.4915 | ambiguous | -0.447 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | D | 0.527666501 | None | None | N |
A/W | 0.9708 | likely_pathogenic | 0.9844 | pathogenic | -1.488 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
A/Y | 0.9129 | likely_pathogenic | 0.9504 | pathogenic | -1.015 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.