Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14934 | 45025;45026;45027 | chr2:178624480;178624479;178624478 | chr2:179489207;179489206;179489205 |
N2AB | 13293 | 40102;40103;40104 | chr2:178624480;178624479;178624478 | chr2:179489207;179489206;179489205 |
N2A | 12366 | 37321;37322;37323 | chr2:178624480;178624479;178624478 | chr2:179489207;179489206;179489205 |
N2B | 5869 | 17830;17831;17832 | chr2:178624480;178624479;178624478 | chr2:179489207;179489206;179489205 |
Novex-1 | 5994 | 18205;18206;18207 | chr2:178624480;178624479;178624478 | chr2:179489207;179489206;179489205 |
Novex-2 | 6061 | 18406;18407;18408 | chr2:178624480;178624479;178624478 | chr2:179489207;179489206;179489205 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.491 | N | 0.353 | 0.151 | 0.0716867268079 | gnomAD-4.0.0 | 6.84769E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52449E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2984 | likely_benign | 0.2584 | benign | -0.577 | Destabilizing | 0.103 | N | 0.266 | neutral | None | None | None | None | N |
N/C | 0.3759 | ambiguous | 0.3102 | benign | 0.205 | Stabilizing | 0.965 | D | 0.475 | neutral | None | None | None | None | N |
N/D | 0.195 | likely_benign | 0.2018 | benign | -0.905 | Destabilizing | 0.285 | N | 0.37 | neutral | N | 0.346015498 | None | None | N |
N/E | 0.4083 | ambiguous | 0.4477 | ambiguous | -0.889 | Destabilizing | 0.345 | N | 0.358 | neutral | None | None | None | None | N |
N/F | 0.3328 | likely_benign | 0.3287 | benign | -0.766 | Destabilizing | 0.001 | N | 0.315 | neutral | None | None | None | None | N |
N/G | 0.459 | ambiguous | 0.4211 | ambiguous | -0.826 | Destabilizing | 0.345 | N | 0.274 | neutral | None | None | None | None | N |
N/H | 0.089 | likely_benign | 0.0825 | benign | -0.863 | Destabilizing | 0.954 | D | 0.472 | neutral | N | 0.352110544 | None | None | N |
N/I | 0.1687 | likely_benign | 0.1592 | benign | 0.016 | Stabilizing | 0.326 | N | 0.464 | neutral | N | 0.341746414 | None | None | N |
N/K | 0.2716 | likely_benign | 0.3201 | benign | -0.146 | Destabilizing | 0.491 | N | 0.353 | neutral | N | 0.31249357 | None | None | N |
N/L | 0.2217 | likely_benign | 0.1988 | benign | 0.016 | Stabilizing | 0.209 | N | 0.29 | neutral | None | None | None | None | N |
N/M | 0.3452 | ambiguous | 0.2998 | benign | 0.674 | Stabilizing | 0.901 | D | 0.485 | neutral | None | None | None | None | N |
N/P | 0.7352 | likely_pathogenic | 0.7674 | pathogenic | -0.154 | Destabilizing | 0.722 | D | 0.534 | neutral | None | None | None | None | N |
N/Q | 0.3169 | likely_benign | 0.3234 | benign | -0.902 | Destabilizing | 0.722 | D | 0.467 | neutral | None | None | None | None | N |
N/R | 0.2758 | likely_benign | 0.3326 | benign | -0.011 | Destabilizing | 0.561 | D | 0.442 | neutral | None | None | None | None | N |
N/S | 0.1078 | likely_benign | 0.0877 | benign | -0.555 | Destabilizing | 0.016 | N | 0.198 | neutral | N | 0.346513697 | None | None | N |
N/T | 0.1432 | likely_benign | 0.1298 | benign | -0.385 | Destabilizing | 0.001 | N | 0.191 | neutral | N | 0.346769061 | None | None | N |
N/V | 0.2183 | likely_benign | 0.1859 | benign | -0.154 | Destabilizing | 0.209 | N | 0.395 | neutral | None | None | None | None | N |
N/W | 0.7169 | likely_pathogenic | 0.7004 | pathogenic | -0.636 | Destabilizing | 0.991 | D | 0.475 | neutral | None | None | None | None | N |
N/Y | 0.1209 | likely_benign | 0.1082 | benign | -0.376 | Destabilizing | 0.326 | N | 0.464 | neutral | N | 0.34892411 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.