Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14935 | 45028;45029;45030 | chr2:178624477;178624476;178624475 | chr2:179489204;179489203;179489202 |
N2AB | 13294 | 40105;40106;40107 | chr2:178624477;178624476;178624475 | chr2:179489204;179489203;179489202 |
N2A | 12367 | 37324;37325;37326 | chr2:178624477;178624476;178624475 | chr2:179489204;179489203;179489202 |
N2B | 5870 | 17833;17834;17835 | chr2:178624477;178624476;178624475 | chr2:179489204;179489203;179489202 |
Novex-1 | 5995 | 18208;18209;18210 | chr2:178624477;178624476;178624475 | chr2:179489204;179489203;179489202 |
Novex-2 | 6062 | 18409;18410;18411 | chr2:178624477;178624476;178624475 | chr2:179489204;179489203;179489202 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1230286076 | None | 0.999 | N | 0.552 | 0.22 | 0.443797312901 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/V | rs1230286076 | None | 0.999 | N | 0.552 | 0.22 | 0.443797312901 | gnomAD-4.0.0 | 6.58172E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47202E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9673 | likely_pathogenic | 0.9748 | pathogenic | -2.884 | Highly Destabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | N |
L/C | 0.962 | likely_pathogenic | 0.9696 | pathogenic | -2.433 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
L/D | 0.9991 | likely_pathogenic | 0.9995 | pathogenic | -3.715 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
L/E | 0.9946 | likely_pathogenic | 0.9972 | pathogenic | -3.475 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
L/F | 0.7531 | likely_pathogenic | 0.8392 | pathogenic | -1.653 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
L/G | 0.9914 | likely_pathogenic | 0.995 | pathogenic | -3.428 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
L/H | 0.9893 | likely_pathogenic | 0.9942 | pathogenic | -2.953 | Highly Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
L/I | 0.2353 | likely_benign | 0.2441 | benign | -1.279 | Destabilizing | 0.999 | D | 0.544 | neutral | None | None | None | None | N |
L/K | 0.987 | likely_pathogenic | 0.9938 | pathogenic | -2.353 | Highly Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
L/M | 0.4564 | ambiguous | 0.5002 | ambiguous | -1.401 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.506403587 | None | None | N |
L/N | 0.9948 | likely_pathogenic | 0.997 | pathogenic | -2.831 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
L/P | 0.995 | likely_pathogenic | 0.9973 | pathogenic | -1.801 | Destabilizing | 1.0 | D | 0.811 | deleterious | D | 0.564117909 | None | None | N |
L/Q | 0.9807 | likely_pathogenic | 0.9897 | pathogenic | -2.646 | Highly Destabilizing | 1.0 | D | 0.81 | deleterious | D | 0.564117909 | None | None | N |
L/R | 0.9748 | likely_pathogenic | 0.9868 | pathogenic | -2.051 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | D | 0.563697447 | None | None | N |
L/S | 0.9948 | likely_pathogenic | 0.9967 | pathogenic | -3.432 | Highly Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
L/T | 0.9682 | likely_pathogenic | 0.9776 | pathogenic | -3.055 | Highly Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
L/V | 0.3485 | ambiguous | 0.3338 | benign | -1.801 | Destabilizing | 0.999 | D | 0.552 | neutral | N | 0.385283281 | None | None | N |
L/W | 0.9648 | likely_pathogenic | 0.983 | pathogenic | -2.168 | Highly Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
L/Y | 0.9775 | likely_pathogenic | 0.9859 | pathogenic | -1.965 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.