Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14942 | 45049;45050;45051 | chr2:178622759;178622758;178622757 | chr2:179487486;179487485;179487484 |
N2AB | 13301 | 40126;40127;40128 | chr2:178622759;178622758;178622757 | chr2:179487486;179487485;179487484 |
N2A | 12374 | 37345;37346;37347 | chr2:178622759;178622758;178622757 | chr2:179487486;179487485;179487484 |
N2B | 5877 | 17854;17855;17856 | chr2:178622759;178622758;178622757 | chr2:179487486;179487485;179487484 |
Novex-1 | 6002 | 18229;18230;18231 | chr2:178622759;178622758;178622757 | chr2:179487486;179487485;179487484 |
Novex-2 | 6069 | 18430;18431;18432 | chr2:178622759;178622758;178622757 | chr2:179487486;179487485;179487484 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs786205391 | None | 0.998 | D | 0.672 | 0.324 | 0.661726622693 | gnomAD-4.0.0 | 6.90904E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.05525E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3965 | ambiguous | 0.3683 | ambiguous | -1.299 | Destabilizing | 0.996 | D | 0.566 | neutral | D | 0.631594757 | None | None | N |
V/C | 0.8979 | likely_pathogenic | 0.8841 | pathogenic | -0.92 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
V/D | 0.8098 | likely_pathogenic | 0.7808 | pathogenic | -0.751 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/E | 0.6639 | likely_pathogenic | 0.6339 | pathogenic | -0.71 | Destabilizing | 1.0 | D | 0.659 | neutral | D | 0.676178714 | None | None | N |
V/F | 0.4875 | ambiguous | 0.4389 | ambiguous | -0.874 | Destabilizing | 0.998 | D | 0.674 | neutral | None | None | None | None | N |
V/G | 0.5773 | likely_pathogenic | 0.5581 | ambiguous | -1.658 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | D | 0.677675637 | None | None | N |
V/H | 0.9276 | likely_pathogenic | 0.9198 | pathogenic | -1.212 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
V/I | 0.1122 | likely_benign | 0.1059 | benign | -0.406 | Destabilizing | 0.971 | D | 0.52 | neutral | None | None | None | None | N |
V/K | 0.831 | likely_pathogenic | 0.8143 | pathogenic | -0.987 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
V/L | 0.4104 | ambiguous | 0.3759 | ambiguous | -0.406 | Destabilizing | 0.275 | N | 0.325 | neutral | D | 0.530107478 | None | None | N |
V/M | 0.3506 | ambiguous | 0.3152 | benign | -0.432 | Destabilizing | 0.998 | D | 0.672 | neutral | D | 0.635942745 | None | None | N |
V/N | 0.7807 | likely_pathogenic | 0.7564 | pathogenic | -0.824 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
V/P | 0.8149 | likely_pathogenic | 0.8111 | pathogenic | -0.667 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
V/Q | 0.7759 | likely_pathogenic | 0.7604 | pathogenic | -0.886 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
V/R | 0.7639 | likely_pathogenic | 0.7462 | pathogenic | -0.649 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
V/S | 0.5922 | likely_pathogenic | 0.5623 | ambiguous | -1.426 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
V/T | 0.3519 | ambiguous | 0.3324 | benign | -1.254 | Destabilizing | 0.997 | D | 0.565 | neutral | None | None | None | None | N |
V/W | 0.9569 | likely_pathogenic | 0.9454 | pathogenic | -1.087 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
V/Y | 0.8629 | likely_pathogenic | 0.8468 | pathogenic | -0.757 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.