Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14943 | 45052;45053;45054 | chr2:178622756;178622755;178622754 | chr2:179487483;179487482;179487481 |
N2AB | 13302 | 40129;40130;40131 | chr2:178622756;178622755;178622754 | chr2:179487483;179487482;179487481 |
N2A | 12375 | 37348;37349;37350 | chr2:178622756;178622755;178622754 | chr2:179487483;179487482;179487481 |
N2B | 5878 | 17857;17858;17859 | chr2:178622756;178622755;178622754 | chr2:179487483;179487482;179487481 |
Novex-1 | 6003 | 18232;18233;18234 | chr2:178622756;178622755;178622754 | chr2:179487483;179487482;179487481 |
Novex-2 | 6070 | 18433;18434;18435 | chr2:178622756;178622755;178622754 | chr2:179487483;179487482;179487481 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.978 | D | 0.639 | 0.55 | 0.515317749148 | gnomAD-4.0.0 | 1.38022E-06 | None | None | None | None | N | None | 3.01386E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 9.04624E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2519 | likely_benign | 0.2355 | benign | -0.307 | Destabilizing | 0.928 | D | 0.602 | neutral | N | 0.500899893 | None | None | N |
E/C | 0.926 | likely_pathogenic | 0.9112 | pathogenic | -0.211 | Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | N |
E/D | 0.2125 | likely_benign | 0.1812 | benign | -0.359 | Destabilizing | 0.039 | N | 0.187 | neutral | N | 0.512600149 | None | None | N |
E/F | 0.8671 | likely_pathogenic | 0.8442 | pathogenic | 0.064 | Stabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/G | 0.3704 | ambiguous | 0.335 | benign | -0.526 | Destabilizing | 0.978 | D | 0.639 | neutral | D | 0.641351339 | None | None | N |
E/H | 0.6202 | likely_pathogenic | 0.5956 | pathogenic | 0.496 | Stabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/I | 0.5183 | ambiguous | 0.5058 | ambiguous | 0.245 | Stabilizing | 0.992 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/K | 0.2784 | likely_benign | 0.2511 | benign | 0.424 | Stabilizing | 0.928 | D | 0.539 | neutral | N | 0.507903935 | None | None | N |
E/L | 0.639 | likely_pathogenic | 0.623 | pathogenic | 0.245 | Stabilizing | 0.992 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/M | 0.6346 | likely_pathogenic | 0.6172 | pathogenic | 0.163 | Stabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/N | 0.4216 | ambiguous | 0.3745 | ambiguous | -0.172 | Destabilizing | 0.968 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/P | 0.8631 | likely_pathogenic | 0.8542 | pathogenic | 0.081 | Stabilizing | 0.992 | D | 0.716 | prob.delet. | None | None | None | None | N |
E/Q | 0.1992 | likely_benign | 0.1954 | benign | -0.09 | Destabilizing | 0.978 | D | 0.638 | neutral | D | 0.548002332 | None | None | N |
E/R | 0.399 | ambiguous | 0.3811 | ambiguous | 0.757 | Stabilizing | 0.992 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/S | 0.3031 | likely_benign | 0.2783 | benign | -0.295 | Destabilizing | 0.944 | D | 0.576 | neutral | None | None | None | None | N |
E/T | 0.2921 | likely_benign | 0.2677 | benign | -0.097 | Destabilizing | 0.983 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/V | 0.2904 | likely_benign | 0.2861 | benign | 0.081 | Stabilizing | 0.989 | D | 0.679 | prob.neutral | D | 0.580646384 | None | None | N |
E/W | 0.9607 | likely_pathogenic | 0.9511 | pathogenic | 0.284 | Stabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
E/Y | 0.7694 | likely_pathogenic | 0.7436 | pathogenic | 0.335 | Stabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.