Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14948 | 45067;45068;45069 | chr2:178622741;178622740;178622739 | chr2:179487468;179487467;179487466 |
N2AB | 13307 | 40144;40145;40146 | chr2:178622741;178622740;178622739 | chr2:179487468;179487467;179487466 |
N2A | 12380 | 37363;37364;37365 | chr2:178622741;178622740;178622739 | chr2:179487468;179487467;179487466 |
N2B | 5883 | 17872;17873;17874 | chr2:178622741;178622740;178622739 | chr2:179487468;179487467;179487466 |
Novex-1 | 6008 | 18247;18248;18249 | chr2:178622741;178622740;178622739 | chr2:179487468;179487467;179487466 |
Novex-2 | 6075 | 18448;18449;18450 | chr2:178622741;178622740;178622739 | chr2:179487468;179487467;179487466 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | N | 0.912 | 0.552 | 0.546044812627 | gnomAD-4.0.0 | 1.61472E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89392E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9263 | likely_pathogenic | 0.917 | pathogenic | -2.071 | Highly Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
L/C | 0.9638 | likely_pathogenic | 0.9573 | pathogenic | -1.5 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/D | 0.9988 | likely_pathogenic | 0.9987 | pathogenic | -1.633 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
L/E | 0.9925 | likely_pathogenic | 0.9913 | pathogenic | -1.451 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/F | 0.8654 | likely_pathogenic | 0.8383 | pathogenic | -1.241 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | D | 0.583579029 | None | None | N |
L/G | 0.9921 | likely_pathogenic | 0.99 | pathogenic | -2.575 | Highly Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
L/H | 0.991 | likely_pathogenic | 0.9892 | pathogenic | -1.966 | Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.648195777 | None | None | N |
L/I | 0.3309 | likely_benign | 0.3277 | benign | -0.65 | Destabilizing | 0.999 | D | 0.513 | neutral | N | 0.45148626 | None | None | N |
L/K | 0.9886 | likely_pathogenic | 0.9879 | pathogenic | -1.175 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/M | 0.4648 | ambiguous | 0.4405 | ambiguous | -0.732 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
L/N | 0.9934 | likely_pathogenic | 0.9922 | pathogenic | -1.339 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/P | 0.9495 | likely_pathogenic | 0.93 | pathogenic | -1.1 | Destabilizing | 1.0 | D | 0.912 | deleterious | N | 0.431808006 | None | None | N |
L/Q | 0.9763 | likely_pathogenic | 0.9733 | pathogenic | -1.255 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
L/R | 0.981 | likely_pathogenic | 0.9789 | pathogenic | -0.99 | Destabilizing | 1.0 | D | 0.896 | deleterious | D | 0.683604551 | None | None | N |
L/S | 0.9904 | likely_pathogenic | 0.9888 | pathogenic | -2.155 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
L/T | 0.9664 | likely_pathogenic | 0.9611 | pathogenic | -1.824 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
L/V | 0.3885 | ambiguous | 0.3737 | ambiguous | -1.1 | Destabilizing | 0.999 | D | 0.49 | neutral | D | 0.582289623 | None | None | N |
L/W | 0.99 | likely_pathogenic | 0.9871 | pathogenic | -1.484 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/Y | 0.9935 | likely_pathogenic | 0.9924 | pathogenic | -1.18 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.