Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14949 | 45070;45071;45072 | chr2:178622738;178622737;178622736 | chr2:179487465;179487464;179487463 |
N2AB | 13308 | 40147;40148;40149 | chr2:178622738;178622737;178622736 | chr2:179487465;179487464;179487463 |
N2A | 12381 | 37366;37367;37368 | chr2:178622738;178622737;178622736 | chr2:179487465;179487464;179487463 |
N2B | 5884 | 17875;17876;17877 | chr2:178622738;178622737;178622736 | chr2:179487465;179487464;179487463 |
Novex-1 | 6009 | 18250;18251;18252 | chr2:178622738;178622737;178622736 | chr2:179487465;179487464;179487463 |
Novex-2 | 6076 | 18451;18452;18453 | chr2:178622738;178622737;178622736 | chr2:179487465;179487464;179487463 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs878912840 | None | 0.454 | N | 0.297 | 0.089 | 0.225215365344 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/A | rs878912840 | None | 0.454 | N | 0.297 | 0.089 | 0.225215365344 | gnomAD-4.0.0 | 6.58666E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47314E-05 | 0 | 0 |
T/S | rs878912840 | 0.003 | 0.136 | N | 0.109 | 0.063 | 0.20549828249 | gnomAD-2.1.1 | 4.21E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.28E-06 | 0 |
T/S | rs878912840 | 0.003 | 0.136 | N | 0.109 | 0.063 | 0.20549828249 | gnomAD-4.0.0 | 6.88067E-07 | None | None | None | None | I | None | 0 | 2.27645E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0879 | likely_benign | 0.0961 | benign | -0.52 | Destabilizing | 0.454 | N | 0.297 | neutral | N | 0.47933944 | None | None | I |
T/C | 0.4972 | ambiguous | 0.5048 | ambiguous | -0.385 | Destabilizing | 0.998 | D | 0.42 | neutral | None | None | None | None | I |
T/D | 0.3247 | likely_benign | 0.3723 | ambiguous | 0.484 | Stabilizing | 0.525 | D | 0.36 | neutral | None | None | None | None | I |
T/E | 0.2158 | likely_benign | 0.2333 | benign | 0.44 | Stabilizing | 0.007 | N | 0.125 | neutral | None | None | None | None | I |
T/F | 0.3182 | likely_benign | 0.3526 | ambiguous | -0.919 | Destabilizing | 0.974 | D | 0.444 | neutral | None | None | None | None | I |
T/G | 0.2341 | likely_benign | 0.2569 | benign | -0.683 | Destabilizing | 0.842 | D | 0.401 | neutral | None | None | None | None | I |
T/H | 0.2171 | likely_benign | 0.2332 | benign | -0.869 | Destabilizing | 0.016 | N | 0.202 | neutral | None | None | None | None | I |
T/I | 0.2132 | likely_benign | 0.2357 | benign | -0.202 | Destabilizing | 0.966 | D | 0.427 | neutral | D | 0.539643304 | None | None | I |
T/K | 0.1436 | likely_benign | 0.149 | benign | -0.308 | Destabilizing | 0.728 | D | 0.367 | neutral | None | None | None | None | I |
T/L | 0.1207 | likely_benign | 0.1336 | benign | -0.202 | Destabilizing | 0.842 | D | 0.366 | neutral | None | None | None | None | I |
T/M | 0.1129 | likely_benign | 0.1211 | benign | -0.154 | Destabilizing | 0.991 | D | 0.407 | neutral | None | None | None | None | I |
T/N | 0.1223 | likely_benign | 0.1405 | benign | -0.18 | Destabilizing | 0.801 | D | 0.287 | neutral | N | 0.50967633 | None | None | I |
T/P | 0.1512 | likely_benign | 0.1788 | benign | -0.278 | Destabilizing | 0.966 | D | 0.433 | neutral | N | 0.511011273 | None | None | I |
T/Q | 0.1687 | likely_benign | 0.1774 | benign | -0.327 | Destabilizing | 0.728 | D | 0.401 | neutral | None | None | None | None | I |
T/R | 0.1214 | likely_benign | 0.122 | benign | -0.082 | Destabilizing | 0.842 | D | 0.407 | neutral | None | None | None | None | I |
T/S | 0.1125 | likely_benign | 0.1248 | benign | -0.471 | Destabilizing | 0.136 | N | 0.109 | neutral | N | 0.480837424 | None | None | I |
T/V | 0.1686 | likely_benign | 0.1871 | benign | -0.278 | Destabilizing | 0.915 | D | 0.281 | neutral | None | None | None | None | I |
T/W | 0.5983 | likely_pathogenic | 0.6372 | pathogenic | -0.901 | Destabilizing | 0.998 | D | 0.439 | neutral | None | None | None | None | I |
T/Y | 0.3108 | likely_benign | 0.3626 | ambiguous | -0.618 | Destabilizing | 0.949 | D | 0.421 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.