Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14950 | 45073;45074;45075 | chr2:178622735;178622734;178622733 | chr2:179487462;179487461;179487460 |
N2AB | 13309 | 40150;40151;40152 | chr2:178622735;178622734;178622733 | chr2:179487462;179487461;179487460 |
N2A | 12382 | 37369;37370;37371 | chr2:178622735;178622734;178622733 | chr2:179487462;179487461;179487460 |
N2B | 5885 | 17878;17879;17880 | chr2:178622735;178622734;178622733 | chr2:179487462;179487461;179487460 |
Novex-1 | 6010 | 18253;18254;18255 | chr2:178622735;178622734;178622733 | chr2:179487462;179487461;179487460 |
Novex-2 | 6077 | 18454;18455;18456 | chr2:178622735;178622734;178622733 | chr2:179487462;179487461;179487460 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs371376631 | 0.076 | 0.992 | D | 0.402 | 0.271 | 0.224531998449 | gnomAD-2.1.1 | 1.26E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.04588E-04 | None | 0 | 0 | 0 |
D/E | rs371376631 | 0.076 | 0.992 | D | 0.402 | 0.271 | 0.224531998449 | gnomAD-4.0.0 | 2.06356E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.54845E-05 | 0 |
D/G | rs1194581912 | 0.027 | 0.992 | D | 0.6 | 0.406 | 0.299770980665 | gnomAD-2.1.1 | 4.19E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.73E-05 | 0 | 0 |
D/G | rs1194581912 | 0.027 | 0.992 | D | 0.6 | 0.406 | 0.299770980665 | gnomAD-4.0.0 | 1.61074E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.89459E-05 | 0 | 0 | 0 | 0 |
D/H | rs571524382 | None | 1.0 | D | 0.653 | 0.389 | None | gnomAD-3.1.2 | 6.6E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/H | rs571524382 | None | 1.0 | D | 0.653 | 0.389 | None | gnomAD-4.0.0 | 1.2461E-06 | None | None | None | None | N | None | 2.68248E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs571524382 | 0.493 | 0.999 | N | 0.619 | 0.36 | 0.267755039894 | gnomAD-2.1.1 | 2.6E-05 | None | None | None | None | N | None | 8.69E-05 | 0 | None | 0 | 5.33E-05 | None | 0 | None | 0 | 3.24E-05 | 0 |
D/N | rs571524382 | 0.493 | 0.999 | N | 0.619 | 0.36 | 0.267755039894 | gnomAD-3.1.2 | 6.6E-05 | None | None | None | None | N | None | 1.45229E-04 | 0 | 0 | 0 | 1.95084E-04 | None | 0 | 0 | 4.42E-05 | 0 | 0 |
D/N | rs571524382 | 0.493 | 0.999 | N | 0.619 | 0.36 | 0.267755039894 | 1000 genomes | 3.99361E-04 | None | None | None | None | N | None | 1.5E-03 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
D/N | rs571524382 | 0.493 | 0.999 | N | 0.619 | 0.36 | 0.267755039894 | gnomAD-4.0.0 | 2.24281E-05 | None | None | None | None | N | None | 1.47295E-04 | 0 | None | 0 | 4.50714E-05 | None | 0 | 0 | 1.95613E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6044 | likely_pathogenic | 0.6809 | pathogenic | -0.18 | Destabilizing | 0.984 | D | 0.564 | neutral | D | 0.541843204 | None | None | N |
D/C | 0.9478 | likely_pathogenic | 0.9599 | pathogenic | 0.01 | Stabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
D/E | 0.5956 | likely_pathogenic | 0.6561 | pathogenic | -0.204 | Destabilizing | 0.992 | D | 0.402 | neutral | D | 0.545166353 | None | None | N |
D/F | 0.9435 | likely_pathogenic | 0.9672 | pathogenic | -0.097 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
D/G | 0.5617 | ambiguous | 0.6207 | pathogenic | -0.369 | Destabilizing | 0.992 | D | 0.6 | neutral | D | 0.67545156 | None | None | N |
D/H | 0.7256 | likely_pathogenic | 0.7891 | pathogenic | 0.19 | Stabilizing | 1.0 | D | 0.653 | neutral | D | 0.580408306 | None | None | N |
D/I | 0.9087 | likely_pathogenic | 0.9405 | pathogenic | 0.267 | Stabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
D/K | 0.8841 | likely_pathogenic | 0.9179 | pathogenic | 0.368 | Stabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | N |
D/L | 0.8921 | likely_pathogenic | 0.9247 | pathogenic | 0.267 | Stabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
D/M | 0.9634 | likely_pathogenic | 0.9762 | pathogenic | 0.284 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
D/N | 0.2279 | likely_benign | 0.2835 | benign | 0.078 | Stabilizing | 0.999 | D | 0.619 | neutral | N | 0.455734976 | None | None | N |
D/P | 0.8238 | likely_pathogenic | 0.8886 | pathogenic | 0.14 | Stabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | N |
D/Q | 0.8657 | likely_pathogenic | 0.8976 | pathogenic | 0.117 | Stabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | N |
D/R | 0.8816 | likely_pathogenic | 0.9085 | pathogenic | 0.583 | Stabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
D/S | 0.3668 | ambiguous | 0.436 | ambiguous | -0.041 | Destabilizing | 0.935 | D | 0.362 | neutral | None | None | None | None | N |
D/T | 0.7566 | likely_pathogenic | 0.8133 | pathogenic | 0.109 | Stabilizing | 0.996 | D | 0.673 | neutral | None | None | None | None | N |
D/V | 0.7808 | likely_pathogenic | 0.8371 | pathogenic | 0.14 | Stabilizing | 0.999 | D | 0.681 | prob.neutral | D | 0.568962704 | None | None | N |
D/W | 0.9881 | likely_pathogenic | 0.9918 | pathogenic | 0.025 | Stabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
D/Y | 0.6649 | likely_pathogenic | 0.7523 | pathogenic | 0.145 | Stabilizing | 1.0 | D | 0.659 | neutral | D | 0.679479781 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.