Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14957 | 45094;45095;45096 | chr2:178622714;178622713;178622712 | chr2:179487441;179487440;179487439 |
N2AB | 13316 | 40171;40172;40173 | chr2:178622714;178622713;178622712 | chr2:179487441;179487440;179487439 |
N2A | 12389 | 37390;37391;37392 | chr2:178622714;178622713;178622712 | chr2:179487441;179487440;179487439 |
N2B | 5892 | 17899;17900;17901 | chr2:178622714;178622713;178622712 | chr2:179487441;179487440;179487439 |
Novex-1 | 6017 | 18274;18275;18276 | chr2:178622714;178622713;178622712 | chr2:179487441;179487440;179487439 |
Novex-2 | 6084 | 18475;18476;18477 | chr2:178622714;178622713;178622712 | chr2:179487441;179487440;179487439 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1489415457 | -0.689 | 0.946 | N | 0.432 | 0.185 | 0.313518423057 | gnomAD-2.1.1 | 4.14E-06 | None | None | None | None | I | None | 0 | 2.96E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1489415457 | -0.689 | 0.946 | N | 0.432 | 0.185 | 0.313518423057 | gnomAD-4.0.0 | 1.60617E-06 | None | None | None | None | I | None | 0 | 2.31342E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs796961766 | -0.967 | 0.811 | N | 0.49 | 0.18 | 0.283761946502 | gnomAD-2.1.1 | 8.28E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.82E-05 | 0 |
E/G | rs796961766 | -0.967 | 0.811 | N | 0.49 | 0.18 | 0.283761946502 | gnomAD-4.0.0 | 2.95411E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.60657E-05 | 0 | 4.99484E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3326 | likely_benign | 0.3428 | ambiguous | -0.688 | Destabilizing | 0.026 | N | 0.284 | neutral | N | 0.463817076 | None | None | I |
E/C | 0.967 | likely_pathogenic | 0.9709 | pathogenic | -0.33 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | I |
E/D | 0.1688 | likely_benign | 0.1867 | benign | -0.732 | Destabilizing | 0.946 | D | 0.432 | neutral | N | 0.455881714 | None | None | I |
E/F | 0.9364 | likely_pathogenic | 0.9411 | pathogenic | -0.392 | Destabilizing | 0.952 | D | 0.637 | neutral | None | None | None | None | I |
E/G | 0.2677 | likely_benign | 0.2715 | benign | -0.969 | Destabilizing | 0.811 | D | 0.49 | neutral | N | 0.458348596 | None | None | I |
E/H | 0.7982 | likely_pathogenic | 0.8207 | pathogenic | -0.497 | Destabilizing | 0.976 | D | 0.381 | neutral | None | None | None | None | I |
E/I | 0.8266 | likely_pathogenic | 0.8149 | pathogenic | 0.049 | Stabilizing | 0.976 | D | 0.644 | neutral | None | None | None | None | I |
E/K | 0.4146 | ambiguous | 0.4165 | ambiguous | -0.406 | Destabilizing | 0.896 | D | 0.424 | neutral | N | 0.458083311 | None | None | I |
E/L | 0.7944 | likely_pathogenic | 0.8033 | pathogenic | 0.049 | Stabilizing | 0.919 | D | 0.521 | neutral | None | None | None | None | I |
E/M | 0.7594 | likely_pathogenic | 0.766 | pathogenic | 0.324 | Stabilizing | 0.999 | D | 0.587 | neutral | None | None | None | None | I |
E/N | 0.4454 | ambiguous | 0.4633 | ambiguous | -0.681 | Destabilizing | 0.988 | D | 0.407 | neutral | None | None | None | None | I |
E/P | 0.9843 | likely_pathogenic | 0.98 | pathogenic | -0.176 | Destabilizing | 0.988 | D | 0.434 | neutral | None | None | None | None | I |
E/Q | 0.2634 | likely_benign | 0.2728 | benign | -0.605 | Destabilizing | 0.984 | D | 0.445 | neutral | N | 0.45570268 | None | None | I |
E/R | 0.5995 | likely_pathogenic | 0.6034 | pathogenic | -0.128 | Destabilizing | 0.988 | D | 0.404 | neutral | None | None | None | None | I |
E/S | 0.4099 | ambiguous | 0.4243 | ambiguous | -0.922 | Destabilizing | 0.851 | D | 0.386 | neutral | None | None | None | None | I |
E/T | 0.5004 | ambiguous | 0.4991 | ambiguous | -0.705 | Destabilizing | 0.919 | D | 0.397 | neutral | None | None | None | None | I |
E/V | 0.5894 | likely_pathogenic | 0.5713 | pathogenic | -0.176 | Destabilizing | 0.811 | D | 0.46 | neutral | D | 0.626335982 | None | None | I |
E/W | 0.9775 | likely_pathogenic | 0.9787 | pathogenic | -0.209 | Destabilizing | 0.997 | D | 0.679 | prob.neutral | None | None | None | None | I |
E/Y | 0.8682 | likely_pathogenic | 0.8834 | pathogenic | -0.176 | Destabilizing | 0.261 | N | 0.313 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.