Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14959 | 45100;45101;45102 | chr2:178622708;178622707;178622706 | chr2:179487435;179487434;179487433 |
N2AB | 13318 | 40177;40178;40179 | chr2:178622708;178622707;178622706 | chr2:179487435;179487434;179487433 |
N2A | 12391 | 37396;37397;37398 | chr2:178622708;178622707;178622706 | chr2:179487435;179487434;179487433 |
N2B | 5894 | 17905;17906;17907 | chr2:178622708;178622707;178622706 | chr2:179487435;179487434;179487433 |
Novex-1 | 6019 | 18280;18281;18282 | chr2:178622708;178622707;178622706 | chr2:179487435;179487434;179487433 |
Novex-2 | 6086 | 18481;18482;18483 | chr2:178622708;178622707;178622706 | chr2:179487435;179487434;179487433 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.999 | D | 0.757 | 0.316 | 0.301122078929 | gnomAD-4.0.0 | 6.86992E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01671E-07 | 0 | 0 |
A/V | None | None | 0.999 | N | 0.683 | 0.348 | 0.275215494804 | gnomAD-4.0.0 | 1.60627E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.45904E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8438 | likely_pathogenic | 0.8598 | pathogenic | -0.889 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
A/D | 0.9895 | likely_pathogenic | 0.9843 | pathogenic | -1.901 | Destabilizing | 0.999 | D | 0.852 | deleterious | D | 0.669450772 | None | None | N |
A/E | 0.978 | likely_pathogenic | 0.9701 | pathogenic | -1.713 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
A/F | 0.9519 | likely_pathogenic | 0.9424 | pathogenic | -0.69 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
A/G | 0.2545 | likely_benign | 0.276 | benign | -1.483 | Destabilizing | 0.275 | N | 0.349 | neutral | D | 0.558524481 | None | None | N |
A/H | 0.9923 | likely_pathogenic | 0.99 | pathogenic | -1.878 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
A/I | 0.7621 | likely_pathogenic | 0.7801 | pathogenic | 0.278 | Stabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
A/K | 0.9923 | likely_pathogenic | 0.9904 | pathogenic | -1.194 | Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
A/L | 0.6715 | likely_pathogenic | 0.6789 | pathogenic | 0.278 | Stabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
A/M | 0.8469 | likely_pathogenic | 0.8442 | pathogenic | 0.154 | Stabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
A/N | 0.9789 | likely_pathogenic | 0.9734 | pathogenic | -1.367 | Destabilizing | 0.999 | D | 0.844 | deleterious | None | None | None | None | N |
A/P | 0.9676 | likely_pathogenic | 0.954 | pathogenic | -0.103 | Destabilizing | 1.0 | D | 0.865 | deleterious | D | 0.669325244 | None | None | N |
A/Q | 0.9719 | likely_pathogenic | 0.9666 | pathogenic | -1.192 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
A/R | 0.9804 | likely_pathogenic | 0.9743 | pathogenic | -1.281 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
A/S | 0.4558 | ambiguous | 0.438 | ambiguous | -1.822 | Destabilizing | 0.992 | D | 0.566 | neutral | D | 0.59095534 | None | None | N |
A/T | 0.5312 | ambiguous | 0.5444 | ambiguous | -1.492 | Destabilizing | 0.999 | D | 0.757 | deleterious | D | 0.537593534 | None | None | N |
A/V | 0.4099 | ambiguous | 0.4273 | ambiguous | -0.103 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | N | 0.440872356 | None | None | N |
A/W | 0.9972 | likely_pathogenic | 0.996 | pathogenic | -1.41 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
A/Y | 0.9857 | likely_pathogenic | 0.9811 | pathogenic | -0.815 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.