Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1496 | 4711;4712;4713 | chr2:178777579;178777578;178777577 | chr2:179642306;179642305;179642304 |
N2AB | 1496 | 4711;4712;4713 | chr2:178777579;178777578;178777577 | chr2:179642306;179642305;179642304 |
N2A | 1496 | 4711;4712;4713 | chr2:178777579;178777578;178777577 | chr2:179642306;179642305;179642304 |
N2B | 1450 | 4573;4574;4575 | chr2:178777579;178777578;178777577 | chr2:179642306;179642305;179642304 |
Novex-1 | 1450 | 4573;4574;4575 | chr2:178777579;178777578;178777577 | chr2:179642306;179642305;179642304 |
Novex-2 | 1450 | 4573;4574;4575 | chr2:178777579;178777578;178777577 | chr2:179642306;179642305;179642304 |
Novex-3 | 1496 | 4711;4712;4713 | chr2:178777579;178777578;178777577 | chr2:179642306;179642305;179642304 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs1451784393 | -0.135 | 0.999 | N | 0.597 | 0.287 | 0.397540356873 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.63E-05 | 0 | 0 |
Q/H | rs1451784393 | -0.135 | 0.999 | N | 0.597 | 0.287 | 0.397540356873 | gnomAD-4.0.0 | 1.59107E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.8831E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3727 | ambiguous | 0.3506 | ambiguous | -0.376 | Destabilizing | 0.997 | D | 0.559 | neutral | None | None | None | None | N |
Q/C | 0.89 | likely_pathogenic | 0.8822 | pathogenic | -0.113 | Destabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | N |
Q/D | 0.8677 | likely_pathogenic | 0.8333 | pathogenic | 0.24 | Stabilizing | 0.997 | D | 0.577 | neutral | None | None | None | None | N |
Q/E | 0.1396 | likely_benign | 0.1311 | benign | 0.293 | Stabilizing | 0.992 | D | 0.46 | neutral | N | 0.479421384 | None | None | N |
Q/F | 0.9633 | likely_pathogenic | 0.9536 | pathogenic | -0.378 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
Q/G | 0.7121 | likely_pathogenic | 0.6678 | pathogenic | -0.626 | Destabilizing | 0.997 | D | 0.54 | neutral | None | None | None | None | N |
Q/H | 0.6565 | likely_pathogenic | 0.5953 | pathogenic | -0.171 | Destabilizing | 0.999 | D | 0.597 | neutral | N | 0.51334847 | None | None | N |
Q/I | 0.6762 | likely_pathogenic | 0.6369 | pathogenic | 0.22 | Stabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
Q/K | 0.1931 | likely_benign | 0.1765 | benign | 0.064 | Stabilizing | 0.997 | D | 0.547 | neutral | N | 0.499416171 | None | None | N |
Q/L | 0.3148 | likely_benign | 0.289 | benign | 0.22 | Stabilizing | 0.997 | D | 0.54 | neutral | N | 0.490918293 | None | None | N |
Q/M | 0.5173 | ambiguous | 0.498 | ambiguous | 0.154 | Stabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | N |
Q/N | 0.6387 | likely_pathogenic | 0.5918 | pathogenic | -0.508 | Destabilizing | 0.999 | D | 0.57 | neutral | None | None | None | None | N |
Q/P | 0.2084 | likely_benign | 0.1837 | benign | 0.05 | Stabilizing | 0.999 | D | 0.643 | neutral | N | 0.394942615 | None | None | N |
Q/R | 0.2622 | likely_benign | 0.2314 | benign | 0.235 | Stabilizing | 0.997 | D | 0.573 | neutral | N | 0.503163805 | None | None | N |
Q/S | 0.5844 | likely_pathogenic | 0.5398 | ambiguous | -0.59 | Destabilizing | 0.997 | D | 0.554 | neutral | None | None | None | None | N |
Q/T | 0.4956 | ambiguous | 0.4469 | ambiguous | -0.357 | Destabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | N |
Q/V | 0.4975 | ambiguous | 0.4637 | ambiguous | 0.05 | Stabilizing | 0.999 | D | 0.555 | neutral | None | None | None | None | N |
Q/W | 0.9502 | likely_pathogenic | 0.9368 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | N |
Q/Y | 0.9042 | likely_pathogenic | 0.8802 | pathogenic | -0.063 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.