Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14965 | 45118;45119;45120 | chr2:178622690;178622689;178622688 | chr2:179487417;179487416;179487415 |
N2AB | 13324 | 40195;40196;40197 | chr2:178622690;178622689;178622688 | chr2:179487417;179487416;179487415 |
N2A | 12397 | 37414;37415;37416 | chr2:178622690;178622689;178622688 | chr2:179487417;179487416;179487415 |
N2B | 5900 | 17923;17924;17925 | chr2:178622690;178622689;178622688 | chr2:179487417;179487416;179487415 |
Novex-1 | 6025 | 18298;18299;18300 | chr2:178622690;178622689;178622688 | chr2:179487417;179487416;179487415 |
Novex-2 | 6092 | 18499;18500;18501 | chr2:178622690;178622689;178622688 | chr2:179487417;179487416;179487415 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | None | N | 0.274 | 0.089 | 0.0551355673512 | gnomAD-4.0.0 | 1.60816E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88334E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7271 | likely_pathogenic | 0.5807 | pathogenic | -2.928 | Highly Destabilizing | 0.035 | N | 0.622 | neutral | None | None | None | None | N |
L/C | 0.8261 | likely_pathogenic | 0.748 | pathogenic | -2.316 | Highly Destabilizing | 0.935 | D | 0.735 | prob.delet. | None | None | None | None | N |
L/D | 0.9875 | likely_pathogenic | 0.9694 | pathogenic | -3.253 | Highly Destabilizing | 0.555 | D | 0.812 | deleterious | None | None | None | None | N |
L/E | 0.9508 | likely_pathogenic | 0.9043 | pathogenic | -3.01 | Highly Destabilizing | 0.555 | D | 0.8 | deleterious | None | None | None | None | N |
L/F | 0.5138 | ambiguous | 0.3548 | ambiguous | -1.696 | Destabilizing | 0.317 | N | 0.705 | prob.neutral | N | 0.510426929 | None | None | N |
L/G | 0.9318 | likely_pathogenic | 0.8706 | pathogenic | -3.464 | Highly Destabilizing | 0.555 | D | 0.799 | deleterious | None | None | None | None | N |
L/H | 0.9183 | likely_pathogenic | 0.8748 | pathogenic | -2.767 | Highly Destabilizing | 0.915 | D | 0.786 | deleterious | D | 0.630535392 | None | None | N |
L/I | 0.075 | likely_benign | 0.0513 | benign | -1.353 | Destabilizing | None | N | 0.264 | neutral | N | 0.471421051 | None | None | N |
L/K | 0.9356 | likely_pathogenic | 0.8696 | pathogenic | -2.126 | Highly Destabilizing | 0.555 | D | 0.781 | deleterious | None | None | None | None | N |
L/M | 0.2181 | likely_benign | 0.1763 | benign | -1.532 | Destabilizing | 0.38 | N | 0.683 | prob.neutral | None | None | None | None | N |
L/N | 0.9135 | likely_pathogenic | 0.8059 | pathogenic | -2.548 | Highly Destabilizing | 0.791 | D | 0.818 | deleterious | None | None | None | None | N |
L/P | 0.9079 | likely_pathogenic | 0.8344 | pathogenic | -1.864 | Destabilizing | 0.741 | D | 0.813 | deleterious | D | 0.564288665 | None | None | N |
L/Q | 0.8815 | likely_pathogenic | 0.8293 | pathogenic | -2.387 | Highly Destabilizing | 0.791 | D | 0.787 | deleterious | None | None | None | None | N |
L/R | 0.9127 | likely_pathogenic | 0.8394 | pathogenic | -1.848 | Destabilizing | 0.484 | N | 0.793 | deleterious | D | 0.630535392 | None | None | N |
L/S | 0.9067 | likely_pathogenic | 0.8086 | pathogenic | -3.236 | Highly Destabilizing | 0.262 | N | 0.772 | deleterious | None | None | None | None | N |
L/T | 0.6395 | likely_pathogenic | 0.4725 | ambiguous | -2.851 | Highly Destabilizing | 0.149 | N | 0.685 | prob.neutral | None | None | None | None | N |
L/V | 0.0931 | likely_benign | 0.0827 | benign | -1.864 | Destabilizing | None | N | 0.274 | neutral | N | 0.38277302 | None | None | N |
L/W | 0.8991 | likely_pathogenic | 0.8592 | pathogenic | -2.01 | Highly Destabilizing | 0.935 | D | 0.755 | deleterious | None | None | None | None | N |
L/Y | 0.8979 | likely_pathogenic | 0.8186 | pathogenic | -1.831 | Destabilizing | 0.555 | D | 0.778 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.