Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14979 | 45160;45161;45162 | chr2:178621987;178621986;178621985 | chr2:179486714;179486713;179486712 |
N2AB | 13338 | 40237;40238;40239 | chr2:178621987;178621986;178621985 | chr2:179486714;179486713;179486712 |
N2A | 12411 | 37456;37457;37458 | chr2:178621987;178621986;178621985 | chr2:179486714;179486713;179486712 |
N2B | 5914 | 17965;17966;17967 | chr2:178621987;178621986;178621985 | chr2:179486714;179486713;179486712 |
Novex-1 | 6039 | 18340;18341;18342 | chr2:178621987;178621986;178621985 | chr2:179486714;179486713;179486712 |
Novex-2 | 6106 | 18541;18542;18543 | chr2:178621987;178621986;178621985 | chr2:179486714;179486713;179486712 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.101 | N | 0.319 | 0.134 | 0.242244723065 | gnomAD-4.0.0 | 6.86271E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01372E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4002 | ambiguous | 0.4166 | ambiguous | -0.789 | Destabilizing | 0.94 | D | 0.383 | neutral | None | None | None | None | N |
A/D | 0.1978 | likely_benign | 0.1998 | benign | -0.353 | Destabilizing | 0.213 | N | 0.473 | neutral | N | 0.504616756 | None | None | N |
A/E | 0.149 | likely_benign | 0.154 | benign | -0.461 | Destabilizing | 0.418 | N | 0.431 | neutral | None | None | None | None | N |
A/F | 0.2161 | likely_benign | 0.2367 | benign | -0.785 | Destabilizing | 0.716 | D | 0.527 | neutral | None | None | None | None | N |
A/G | 0.1363 | likely_benign | 0.1407 | benign | -0.545 | Destabilizing | 0.183 | N | 0.308 | neutral | N | 0.511074059 | None | None | N |
A/H | 0.3299 | likely_benign | 0.3444 | ambiguous | -0.454 | Destabilizing | 0.836 | D | 0.474 | neutral | None | None | None | None | N |
A/I | 0.1264 | likely_benign | 0.1384 | benign | -0.304 | Destabilizing | 0.002 | N | 0.221 | neutral | None | None | None | None | N |
A/K | 0.2611 | likely_benign | 0.2739 | benign | -0.767 | Destabilizing | 0.418 | N | 0.434 | neutral | None | None | None | None | N |
A/L | 0.1151 | likely_benign | 0.1282 | benign | -0.304 | Destabilizing | 0.022 | N | 0.319 | neutral | None | None | None | None | N |
A/M | 0.1342 | likely_benign | 0.1459 | benign | -0.451 | Destabilizing | 0.027 | N | 0.233 | neutral | None | None | None | None | N |
A/N | 0.1467 | likely_benign | 0.1511 | benign | -0.507 | Destabilizing | 0.01 | N | 0.283 | neutral | None | None | None | None | N |
A/P | 0.6908 | likely_pathogenic | 0.6925 | pathogenic | -0.309 | Destabilizing | 0.523 | D | 0.473 | neutral | D | 0.551166902 | None | None | N |
A/Q | 0.1898 | likely_benign | 0.2005 | benign | -0.712 | Destabilizing | 0.836 | D | 0.495 | neutral | None | None | None | None | N |
A/R | 0.2259 | likely_benign | 0.2343 | benign | -0.325 | Destabilizing | 0.593 | D | 0.473 | neutral | None | None | None | None | N |
A/S | 0.0827 | likely_benign | 0.0836 | benign | -0.782 | Destabilizing | 0.009 | N | 0.165 | neutral | N | 0.452298891 | None | None | N |
A/T | 0.0645 | likely_benign | 0.0636 | benign | -0.799 | Destabilizing | 0.101 | N | 0.319 | neutral | N | 0.484499134 | None | None | N |
A/V | 0.0774 | likely_benign | 0.0798 | benign | -0.309 | Destabilizing | 0.001 | N | 0.118 | neutral | N | 0.429417781 | None | None | N |
A/W | 0.5995 | likely_pathogenic | 0.6277 | pathogenic | -0.974 | Destabilizing | 0.983 | D | 0.503 | neutral | None | None | None | None | N |
A/Y | 0.3628 | ambiguous | 0.3898 | ambiguous | -0.618 | Destabilizing | 0.836 | D | 0.506 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.