Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14982 | 45169;45170;45171 | chr2:178621978;178621977;178621976 | chr2:179486705;179486704;179486703 |
N2AB | 13341 | 40246;40247;40248 | chr2:178621978;178621977;178621976 | chr2:179486705;179486704;179486703 |
N2A | 12414 | 37465;37466;37467 | chr2:178621978;178621977;178621976 | chr2:179486705;179486704;179486703 |
N2B | 5917 | 17974;17975;17976 | chr2:178621978;178621977;178621976 | chr2:179486705;179486704;179486703 |
Novex-1 | 6042 | 18349;18350;18351 | chr2:178621978;178621977;178621976 | chr2:179486705;179486704;179486703 |
Novex-2 | 6109 | 18550;18551;18552 | chr2:178621978;178621977;178621976 | chr2:179486705;179486704;179486703 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.002 | N | 0.163 | 0.156 | 0.238705975628 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5421 | ambiguous | 0.6395 | pathogenic | -0.02 | Destabilizing | 0.688 | D | 0.435 | neutral | None | None | None | None | N |
K/C | 0.8457 | likely_pathogenic | 0.8852 | pathogenic | -0.596 | Destabilizing | 0.998 | D | 0.463 | neutral | None | None | None | None | N |
K/D | 0.851 | likely_pathogenic | 0.9021 | pathogenic | -0.309 | Destabilizing | 0.915 | D | 0.441 | neutral | None | None | None | None | N |
K/E | 0.4028 | ambiguous | 0.4943 | ambiguous | -0.302 | Destabilizing | 0.625 | D | 0.514 | neutral | N | 0.473900731 | None | None | N |
K/F | 0.8784 | likely_pathogenic | 0.9221 | pathogenic | -0.336 | Destabilizing | 0.991 | D | 0.449 | neutral | None | None | None | None | N |
K/G | 0.5718 | likely_pathogenic | 0.6721 | pathogenic | -0.163 | Destabilizing | 0.915 | D | 0.445 | neutral | None | None | None | None | N |
K/H | 0.4887 | ambiguous | 0.5412 | ambiguous | -0.216 | Destabilizing | 0.974 | D | 0.443 | neutral | None | None | None | None | N |
K/I | 0.5575 | ambiguous | 0.6631 | pathogenic | 0.275 | Stabilizing | 0.966 | D | 0.447 | neutral | N | 0.501264314 | None | None | N |
K/L | 0.5307 | ambiguous | 0.6305 | pathogenic | 0.275 | Stabilizing | 0.842 | D | 0.445 | neutral | None | None | None | None | N |
K/M | 0.46 | ambiguous | 0.5602 | ambiguous | -0.223 | Destabilizing | 0.991 | D | 0.437 | neutral | None | None | None | None | N |
K/N | 0.6883 | likely_pathogenic | 0.7748 | pathogenic | -0.18 | Destabilizing | 0.801 | D | 0.436 | neutral | N | 0.511224395 | None | None | N |
K/P | 0.6832 | likely_pathogenic | 0.769 | pathogenic | 0.201 | Stabilizing | 0.991 | D | 0.426 | neutral | None | None | None | None | N |
K/Q | 0.2131 | likely_benign | 0.2495 | benign | -0.264 | Destabilizing | 0.801 | D | 0.492 | neutral | N | 0.491835359 | None | None | N |
K/R | 0.0864 | likely_benign | 0.0899 | benign | -0.142 | Destabilizing | 0.002 | N | 0.163 | neutral | N | 0.418285985 | None | None | N |
K/S | 0.6145 | likely_pathogenic | 0.7043 | pathogenic | -0.516 | Destabilizing | 0.842 | D | 0.449 | neutral | None | None | None | None | N |
K/T | 0.3058 | likely_benign | 0.3835 | ambiguous | -0.383 | Destabilizing | 0.891 | D | 0.429 | neutral | N | 0.478599515 | None | None | N |
K/V | 0.5123 | ambiguous | 0.6105 | pathogenic | 0.201 | Stabilizing | 0.974 | D | 0.421 | neutral | None | None | None | None | N |
K/W | 0.8472 | likely_pathogenic | 0.8905 | pathogenic | -0.464 | Destabilizing | 0.998 | D | 0.529 | neutral | None | None | None | None | N |
K/Y | 0.8183 | likely_pathogenic | 0.8723 | pathogenic | -0.107 | Destabilizing | 0.991 | D | 0.442 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.