Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14994 | 45205;45206;45207 | chr2:178621942;178621941;178621940 | chr2:179486669;179486668;179486667 |
N2AB | 13353 | 40282;40283;40284 | chr2:178621942;178621941;178621940 | chr2:179486669;179486668;179486667 |
N2A | 12426 | 37501;37502;37503 | chr2:178621942;178621941;178621940 | chr2:179486669;179486668;179486667 |
N2B | 5929 | 18010;18011;18012 | chr2:178621942;178621941;178621940 | chr2:179486669;179486668;179486667 |
Novex-1 | 6054 | 18385;18386;18387 | chr2:178621942;178621941;178621940 | chr2:179486669;179486668;179486667 |
Novex-2 | 6121 | 18586;18587;18588 | chr2:178621942;178621941;178621940 | chr2:179486669;179486668;179486667 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.005 | N | 0.155 | 0.106 | 0.428169733428 | gnomAD-4.0.0 | 2.05514E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.53704E-05 | None | 0 | 0 | 1.80031E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5777 | likely_pathogenic | 0.5506 | ambiguous | -1.106 | Destabilizing | 0.998 | D | 0.503 | neutral | None | None | None | None | N |
A/D | 0.2851 | likely_benign | 0.2897 | benign | -1.185 | Destabilizing | 0.974 | D | 0.601 | neutral | None | None | None | None | N |
A/E | 0.2724 | likely_benign | 0.2789 | benign | -1.269 | Destabilizing | 0.801 | D | 0.471 | neutral | N | 0.489972261 | None | None | N |
A/F | 0.3474 | ambiguous | 0.3372 | benign | -1.201 | Destabilizing | 0.949 | D | 0.628 | neutral | None | None | None | None | N |
A/G | 0.1533 | likely_benign | 0.1567 | benign | -1.076 | Destabilizing | 0.891 | D | 0.441 | neutral | N | 0.448701922 | None | None | N |
A/H | 0.4524 | ambiguous | 0.4703 | ambiguous | -1.014 | Destabilizing | 0.998 | D | 0.62 | neutral | None | None | None | None | N |
A/I | 0.2563 | likely_benign | 0.2635 | benign | -0.617 | Destabilizing | 0.728 | D | 0.442 | neutral | None | None | None | None | N |
A/K | 0.3372 | likely_benign | 0.3642 | ambiguous | -1.058 | Destabilizing | 0.728 | D | 0.457 | neutral | None | None | None | None | N |
A/L | 0.196 | likely_benign | 0.1962 | benign | -0.617 | Destabilizing | 0.525 | D | 0.445 | neutral | None | None | None | None | N |
A/M | 0.2216 | likely_benign | 0.2428 | benign | -0.542 | Destabilizing | 0.974 | D | 0.54 | neutral | None | None | None | None | N |
A/N | 0.19 | likely_benign | 0.2 | benign | -0.812 | Destabilizing | 0.974 | D | 0.611 | neutral | None | None | None | None | N |
A/P | 0.1893 | likely_benign | 0.1938 | benign | -0.676 | Destabilizing | 0.989 | D | 0.53 | neutral | N | 0.47922552 | None | None | N |
A/Q | 0.2914 | likely_benign | 0.3189 | benign | -1.097 | Destabilizing | 0.949 | D | 0.532 | neutral | None | None | None | None | N |
A/R | 0.2728 | likely_benign | 0.2797 | benign | -0.6 | Destabilizing | 0.016 | N | 0.255 | neutral | None | None | None | None | N |
A/S | 0.09 | likely_benign | 0.0954 | benign | -1.133 | Destabilizing | 0.891 | D | 0.476 | neutral | N | 0.480023346 | None | None | N |
A/T | 0.0899 | likely_benign | 0.0926 | benign | -1.138 | Destabilizing | 0.801 | D | 0.435 | neutral | N | 0.419126719 | None | None | N |
A/V | 0.144 | likely_benign | 0.1414 | benign | -0.676 | Destabilizing | 0.005 | N | 0.155 | neutral | N | 0.439444713 | None | None | N |
A/W | 0.7213 | likely_pathogenic | 0.7235 | pathogenic | -1.369 | Destabilizing | 0.998 | D | 0.692 | prob.neutral | None | None | None | None | N |
A/Y | 0.5079 | ambiguous | 0.511 | ambiguous | -1.017 | Destabilizing | 0.974 | D | 0.628 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.