Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14996 | 45211;45212;45213 | chr2:178621936;178621935;178621934 | chr2:179486663;179486662;179486661 |
N2AB | 13355 | 40288;40289;40290 | chr2:178621936;178621935;178621934 | chr2:179486663;179486662;179486661 |
N2A | 12428 | 37507;37508;37509 | chr2:178621936;178621935;178621934 | chr2:179486663;179486662;179486661 |
N2B | 5931 | 18016;18017;18018 | chr2:178621936;178621935;178621934 | chr2:179486663;179486662;179486661 |
Novex-1 | 6056 | 18391;18392;18393 | chr2:178621936;178621935;178621934 | chr2:179486663;179486662;179486661 |
Novex-2 | 6123 | 18592;18593;18594 | chr2:178621936;178621935;178621934 | chr2:179486663;179486662;179486661 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs765602798 | -2.079 | 0.999 | N | 0.789 | 0.309 | 0.247872288689 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | N | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
R/C | rs765602798 | -2.079 | 0.999 | N | 0.789 | 0.309 | 0.247872288689 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/C | rs765602798 | -2.079 | 0.999 | N | 0.789 | 0.309 | 0.247872288689 | gnomAD-4.0.0 | 1.24086E-05 | None | None | None | None | N | None | 0 | 1.67319E-05 | None | 0 | 2.24487E-05 | None | 0 | 0 | 1.35722E-05 | 2.19785E-05 | 0 |
R/H | rs762128685 | -2.393 | 0.029 | N | 0.433 | 0.15 | None | gnomAD-2.1.1 | 2.43E-05 | None | None | None | None | N | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 4.46E-05 | 0 |
R/H | rs762128685 | -2.393 | 0.029 | N | 0.433 | 0.15 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
R/H | rs762128685 | -2.393 | 0.029 | N | 0.433 | 0.15 | None | gnomAD-4.0.0 | 5.70811E-05 | None | None | None | None | N | None | 2.67308E-05 | 3.34717E-05 | None | 0 | 0 | None | 0 | 1.64799E-04 | 7.21027E-05 | 0 | 3.20821E-05 |
R/L | rs762128685 | -0.936 | 0.911 | N | 0.726 | 0.262 | 0.244539031024 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
R/L | rs762128685 | -0.936 | 0.911 | N | 0.726 | 0.262 | 0.244539031024 | gnomAD-4.0.0 | 4.11012E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.40081E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7536 | likely_pathogenic | 0.6969 | pathogenic | -1.928 | Destabilizing | 0.842 | D | 0.72 | prob.delet. | None | None | None | None | N |
R/C | 0.3051 | likely_benign | 0.2585 | benign | -2.07 | Highly Destabilizing | 0.999 | D | 0.789 | deleterious | N | 0.437250542 | None | None | N |
R/D | 0.9255 | likely_pathogenic | 0.9028 | pathogenic | -1.19 | Destabilizing | 0.842 | D | 0.743 | deleterious | None | None | None | None | N |
R/E | 0.7152 | likely_pathogenic | 0.6621 | pathogenic | -0.982 | Destabilizing | 0.842 | D | 0.681 | prob.neutral | None | None | None | None | N |
R/F | 0.8641 | likely_pathogenic | 0.8158 | pathogenic | -1.329 | Destabilizing | 0.974 | D | 0.798 | deleterious | None | None | None | None | N |
R/G | 0.6552 | likely_pathogenic | 0.587 | pathogenic | -2.258 | Highly Destabilizing | 0.911 | D | 0.729 | prob.delet. | D | 0.595041179 | None | None | N |
R/H | 0.1685 | likely_benign | 0.1456 | benign | -2.233 | Highly Destabilizing | 0.029 | N | 0.433 | neutral | N | 0.447005898 | None | None | N |
R/I | 0.6723 | likely_pathogenic | 0.5808 | pathogenic | -0.977 | Destabilizing | 0.974 | D | 0.799 | deleterious | None | None | None | None | N |
R/K | 0.2583 | likely_benign | 0.2422 | benign | -1.507 | Destabilizing | 0.688 | D | 0.655 | neutral | None | None | None | None | N |
R/L | 0.6057 | likely_pathogenic | 0.5347 | ambiguous | -0.977 | Destabilizing | 0.911 | D | 0.726 | prob.delet. | N | 0.506325868 | None | None | N |
R/M | 0.6681 | likely_pathogenic | 0.6025 | pathogenic | -1.483 | Destabilizing | 0.998 | D | 0.744 | deleterious | None | None | None | None | N |
R/N | 0.7964 | likely_pathogenic | 0.7702 | pathogenic | -1.515 | Destabilizing | 0.842 | D | 0.693 | prob.neutral | None | None | None | None | N |
R/P | 0.9713 | likely_pathogenic | 0.9586 | pathogenic | -1.282 | Destabilizing | 0.996 | D | 0.765 | deleterious | D | 0.600293922 | None | None | N |
R/Q | 0.1738 | likely_benign | 0.1553 | benign | -1.358 | Destabilizing | 0.842 | D | 0.711 | prob.delet. | None | None | None | None | N |
R/S | 0.7639 | likely_pathogenic | 0.7127 | pathogenic | -2.325 | Highly Destabilizing | 0.911 | D | 0.725 | prob.delet. | N | 0.43366414 | None | None | N |
R/T | 0.5819 | likely_pathogenic | 0.4992 | ambiguous | -1.906 | Destabilizing | 0.915 | D | 0.732 | prob.delet. | None | None | None | None | N |
R/V | 0.7092 | likely_pathogenic | 0.6245 | pathogenic | -1.282 | Destabilizing | 0.974 | D | 0.773 | deleterious | None | None | None | None | N |
R/W | 0.404 | ambiguous | 0.3363 | benign | -0.94 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
R/Y | 0.6365 | likely_pathogenic | 0.5905 | pathogenic | -0.727 | Destabilizing | 0.949 | D | 0.754 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.