Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15010 | 45253;45254;45255 | chr2:178621894;178621893;178621892 | chr2:179486621;179486620;179486619 |
N2AB | 13369 | 40330;40331;40332 | chr2:178621894;178621893;178621892 | chr2:179486621;179486620;179486619 |
N2A | 12442 | 37549;37550;37551 | chr2:178621894;178621893;178621892 | chr2:179486621;179486620;179486619 |
N2B | 5945 | 18058;18059;18060 | chr2:178621894;178621893;178621892 | chr2:179486621;179486620;179486619 |
Novex-1 | 6070 | 18433;18434;18435 | chr2:178621894;178621893;178621892 | chr2:179486621;179486620;179486619 |
Novex-2 | 6137 | 18634;18635;18636 | chr2:178621894;178621893;178621892 | chr2:179486621;179486620;179486619 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.999 | D | 0.665 | 0.398 | 0.394536629495 | gnomAD-4.0.0 | 1.59483E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86397E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2535 | likely_benign | 0.2854 | benign | -0.928 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | N | 0.504937772 | None | None | N |
E/C | 0.9382 | likely_pathogenic | 0.9564 | pathogenic | -0.236 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
E/D | 0.2967 | likely_benign | 0.343 | ambiguous | -0.925 | Destabilizing | 0.999 | D | 0.545 | neutral | N | 0.513755328 | None | None | N |
E/F | 0.8494 | likely_pathogenic | 0.8957 | pathogenic | -0.774 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/G | 0.3676 | ambiguous | 0.4169 | ambiguous | -1.223 | Destabilizing | 1.0 | D | 0.745 | deleterious | D | 0.706351134 | None | None | N |
E/H | 0.715 | likely_pathogenic | 0.7943 | pathogenic | -1.013 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/I | 0.4708 | ambiguous | 0.5925 | pathogenic | -0.142 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
E/K | 0.2647 | likely_benign | 0.3587 | ambiguous | -0.205 | Destabilizing | 0.999 | D | 0.665 | neutral | D | 0.534174752 | None | None | N |
E/L | 0.5494 | ambiguous | 0.6392 | pathogenic | -0.142 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/M | 0.5941 | likely_pathogenic | 0.6822 | pathogenic | 0.405 | Stabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
E/N | 0.4523 | ambiguous | 0.5776 | pathogenic | -0.608 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/P | 0.8257 | likely_pathogenic | 0.854 | pathogenic | -0.384 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
E/Q | 0.2303 | likely_benign | 0.2818 | benign | -0.543 | Destabilizing | 1.0 | D | 0.641 | neutral | N | 0.501731892 | None | None | N |
E/R | 0.4242 | ambiguous | 0.4988 | ambiguous | -0.113 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/S | 0.3495 | ambiguous | 0.4237 | ambiguous | -0.869 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
E/T | 0.3426 | ambiguous | 0.4354 | ambiguous | -0.614 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
E/V | 0.2913 | likely_benign | 0.3656 | ambiguous | -0.384 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.502501557 | None | None | N |
E/W | 0.9577 | likely_pathogenic | 0.9679 | pathogenic | -0.563 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
E/Y | 0.8084 | likely_pathogenic | 0.8675 | pathogenic | -0.509 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.