Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15016 | 45271;45272;45273 | chr2:178621876;178621875;178621874 | chr2:179486603;179486602;179486601 |
N2AB | 13375 | 40348;40349;40350 | chr2:178621876;178621875;178621874 | chr2:179486603;179486602;179486601 |
N2A | 12448 | 37567;37568;37569 | chr2:178621876;178621875;178621874 | chr2:179486603;179486602;179486601 |
N2B | 5951 | 18076;18077;18078 | chr2:178621876;178621875;178621874 | chr2:179486603;179486602;179486601 |
Novex-1 | 6076 | 18451;18452;18453 | chr2:178621876;178621875;178621874 | chr2:179486603;179486602;179486601 |
Novex-2 | 6143 | 18652;18653;18654 | chr2:178621876;178621875;178621874 | chr2:179486603;179486602;179486601 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.062 | N | 0.563 | 0.142 | 0.234412748748 | gnomAD-4.0.0 | 1.59483E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43427E-05 | 0 |
R/T | None | None | 0.117 | N | 0.555 | 0.146 | 0.245101548738 | gnomAD-4.0.0 | 7.20193E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.87501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2719 | likely_benign | 0.288 | benign | -0.018 | Destabilizing | 0.035 | N | 0.524 | neutral | None | None | None | None | N |
R/C | 0.2625 | likely_benign | 0.2701 | benign | -0.381 | Destabilizing | 0.935 | D | 0.549 | neutral | None | None | None | None | N |
R/D | 0.4295 | ambiguous | 0.468 | ambiguous | -0.4 | Destabilizing | 0.149 | N | 0.534 | neutral | None | None | None | None | N |
R/E | 0.2699 | likely_benign | 0.2751 | benign | -0.374 | Destabilizing | 0.035 | N | 0.481 | neutral | None | None | None | None | N |
R/F | 0.6052 | likely_pathogenic | 0.6089 | pathogenic | -0.398 | Destabilizing | 0.791 | D | 0.533 | neutral | None | None | None | None | N |
R/G | 0.1415 | likely_benign | 0.1497 | benign | -0.12 | Destabilizing | 0.117 | N | 0.568 | neutral | N | 0.402361062 | None | None | N |
R/H | 0.1549 | likely_benign | 0.1548 | benign | -0.614 | Destabilizing | 0.555 | D | 0.521 | neutral | None | None | None | None | N |
R/I | 0.3091 | likely_benign | 0.2998 | benign | 0.2 | Stabilizing | 0.555 | D | 0.537 | neutral | None | None | None | None | N |
R/K | 0.1045 | likely_benign | 0.1079 | benign | -0.306 | Destabilizing | None | N | 0.199 | neutral | N | 0.415263212 | None | None | N |
R/L | 0.2353 | likely_benign | 0.2396 | benign | 0.2 | Stabilizing | 0.149 | N | 0.568 | neutral | None | None | None | None | N |
R/M | 0.2763 | likely_benign | 0.2775 | benign | -0.209 | Destabilizing | 0.741 | D | 0.518 | neutral | N | 0.441157988 | None | None | N |
R/N | 0.3898 | ambiguous | 0.4269 | ambiguous | -0.278 | Destabilizing | 0.149 | N | 0.511 | neutral | None | None | None | None | N |
R/P | 0.2994 | likely_benign | 0.3228 | benign | 0.142 | Stabilizing | 0.555 | D | 0.541 | neutral | None | None | None | None | N |
R/Q | 0.1046 | likely_benign | 0.1076 | benign | -0.276 | Destabilizing | 0.081 | N | 0.544 | neutral | None | None | None | None | N |
R/S | 0.3295 | likely_benign | 0.3454 | ambiguous | -0.386 | Destabilizing | 0.062 | N | 0.563 | neutral | N | 0.439349723 | None | None | N |
R/T | 0.2147 | likely_benign | 0.2163 | benign | -0.273 | Destabilizing | 0.117 | N | 0.555 | neutral | N | 0.440724558 | None | None | N |
R/V | 0.368 | ambiguous | 0.3743 | ambiguous | 0.142 | Stabilizing | 0.38 | N | 0.528 | neutral | None | None | None | None | N |
R/W | 0.281 | likely_benign | 0.2656 | benign | -0.639 | Destabilizing | 0.915 | D | 0.591 | neutral | N | 0.511712952 | None | None | N |
R/Y | 0.4827 | ambiguous | 0.4903 | ambiguous | -0.248 | Destabilizing | 0.555 | D | 0.547 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.