Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15019 | 45280;45281;45282 | chr2:178621867;178621866;178621865 | chr2:179486594;179486593;179486592 |
N2AB | 13378 | 40357;40358;40359 | chr2:178621867;178621866;178621865 | chr2:179486594;179486593;179486592 |
N2A | 12451 | 37576;37577;37578 | chr2:178621867;178621866;178621865 | chr2:179486594;179486593;179486592 |
N2B | 5954 | 18085;18086;18087 | chr2:178621867;178621866;178621865 | chr2:179486594;179486593;179486592 |
Novex-1 | 6079 | 18460;18461;18462 | chr2:178621867;178621866;178621865 | chr2:179486594;179486593;179486592 |
Novex-2 | 6146 | 18661;18662;18663 | chr2:178621867;178621866;178621865 | chr2:179486594;179486593;179486592 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | rs1553719573 | None | 0.996 | N | 0.579 | 0.36 | 0.294206760003 | gnomAD-4.0.0 | 1.36979E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 3.47826E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.4102 | ambiguous | 0.4048 | ambiguous | -0.632 | Destabilizing | 0.863 | D | 0.568 | neutral | None | None | None | None | N |
R/C | 0.2541 | likely_benign | 0.2295 | benign | -0.644 | Destabilizing | 0.999 | D | 0.57 | neutral | None | None | None | None | N |
R/D | 0.761 | likely_pathogenic | 0.7557 | pathogenic | 0.02 | Stabilizing | 0.969 | D | 0.583 | neutral | None | None | None | None | N |
R/E | 0.3795 | ambiguous | 0.3685 | ambiguous | 0.102 | Stabilizing | 0.863 | D | 0.615 | neutral | None | None | None | None | N |
R/F | 0.6384 | likely_pathogenic | 0.6294 | pathogenic | -0.752 | Destabilizing | 0.997 | D | 0.573 | neutral | None | None | None | None | N |
R/G | 0.3029 | likely_benign | 0.3188 | benign | -0.864 | Destabilizing | 0.959 | D | 0.565 | neutral | N | 0.45131756 | None | None | N |
R/H | 0.1286 | likely_benign | 0.1237 | benign | -1.205 | Destabilizing | 0.997 | D | 0.607 | neutral | None | None | None | None | N |
R/I | 0.3101 | likely_benign | 0.3155 | benign | -0.036 | Destabilizing | 0.996 | D | 0.579 | neutral | N | 0.473467298 | None | None | N |
R/K | 0.104 | likely_benign | 0.1031 | benign | -0.575 | Destabilizing | 0.021 | N | 0.209 | neutral | N | 0.370015021 | None | None | N |
R/L | 0.3352 | likely_benign | 0.3207 | benign | -0.036 | Destabilizing | 0.969 | D | 0.565 | neutral | None | None | None | None | N |
R/M | 0.3163 | likely_benign | 0.3203 | benign | -0.311 | Destabilizing | 0.997 | D | 0.585 | neutral | None | None | None | None | N |
R/N | 0.614 | likely_pathogenic | 0.617 | pathogenic | -0.127 | Destabilizing | 0.969 | D | 0.602 | neutral | None | None | None | None | N |
R/P | 0.8713 | likely_pathogenic | 0.8664 | pathogenic | -0.215 | Destabilizing | 0.997 | D | 0.592 | neutral | None | None | None | None | N |
R/Q | 0.1092 | likely_benign | 0.11 | benign | -0.34 | Destabilizing | 0.939 | D | 0.613 | neutral | None | None | None | None | N |
R/S | 0.4669 | ambiguous | 0.4633 | ambiguous | -0.815 | Destabilizing | 0.92 | D | 0.57 | neutral | N | 0.438154726 | None | None | N |
R/T | 0.2401 | likely_benign | 0.2344 | benign | -0.578 | Destabilizing | 0.959 | D | 0.57 | neutral | N | 0.445165411 | None | None | N |
R/V | 0.3749 | ambiguous | 0.3692 | ambiguous | -0.215 | Destabilizing | 0.991 | D | 0.569 | neutral | None | None | None | None | N |
R/W | 0.2797 | likely_benign | 0.2791 | benign | -0.558 | Destabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | N |
R/Y | 0.5231 | ambiguous | 0.5218 | ambiguous | -0.217 | Destabilizing | 0.997 | D | 0.597 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.