Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15022 | 45289;45290;45291 | chr2:178621858;178621857;178621856 | chr2:179486585;179486584;179486583 |
N2AB | 13381 | 40366;40367;40368 | chr2:178621858;178621857;178621856 | chr2:179486585;179486584;179486583 |
N2A | 12454 | 37585;37586;37587 | chr2:178621858;178621857;178621856 | chr2:179486585;179486584;179486583 |
N2B | 5957 | 18094;18095;18096 | chr2:178621858;178621857;178621856 | chr2:179486585;179486584;179486583 |
Novex-1 | 6082 | 18469;18470;18471 | chr2:178621858;178621857;178621856 | chr2:179486585;179486584;179486583 |
Novex-2 | 6149 | 18670;18671;18672 | chr2:178621858;178621857;178621856 | chr2:179486585;179486584;179486583 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs1296403453 | -0.928 | 1.0 | N | 0.705 | 0.416 | 0.168933306366 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 9.98E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
G/S | rs1296403453 | -0.928 | 1.0 | N | 0.705 | 0.416 | 0.168933306366 | gnomAD-4.0.0 | 1.59509E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.78057E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2744 | likely_benign | 0.2737 | benign | -0.663 | Destabilizing | 1.0 | D | 0.642 | neutral | N | 0.429070932 | None | None | N |
G/C | 0.7411 | likely_pathogenic | 0.7098 | pathogenic | -1.235 | Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.496338705 | None | None | N |
G/D | 0.9863 | likely_pathogenic | 0.9826 | pathogenic | -1.131 | Destabilizing | 1.0 | D | 0.82 | deleterious | N | 0.499398165 | None | None | N |
G/E | 0.9852 | likely_pathogenic | 0.9837 | pathogenic | -1.075 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
G/F | 0.9904 | likely_pathogenic | 0.9889 | pathogenic | -0.88 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
G/H | 0.9929 | likely_pathogenic | 0.991 | pathogenic | -1.438 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
G/I | 0.9547 | likely_pathogenic | 0.9609 | pathogenic | 0.076 | Stabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
G/K | 0.9921 | likely_pathogenic | 0.9927 | pathogenic | -0.855 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
G/L | 0.9665 | likely_pathogenic | 0.9671 | pathogenic | 0.076 | Stabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
G/M | 0.9793 | likely_pathogenic | 0.9796 | pathogenic | -0.217 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
G/N | 0.9831 | likely_pathogenic | 0.9814 | pathogenic | -0.827 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
G/P | 0.9981 | likely_pathogenic | 0.998 | pathogenic | -0.127 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
G/Q | 0.9845 | likely_pathogenic | 0.9829 | pathogenic | -0.834 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
G/R | 0.9745 | likely_pathogenic | 0.9713 | pathogenic | -0.868 | Destabilizing | 1.0 | D | 0.834 | deleterious | N | 0.498213693 | None | None | N |
G/S | 0.5496 | ambiguous | 0.5174 | ambiguous | -1.262 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | N | 0.442425152 | None | None | N |
G/T | 0.8401 | likely_pathogenic | 0.86 | pathogenic | -1.087 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
G/V | 0.8581 | likely_pathogenic | 0.8719 | pathogenic | -0.127 | Destabilizing | 1.0 | D | 0.851 | deleterious | N | 0.487774893 | None | None | N |
G/W | 0.9923 | likely_pathogenic | 0.9894 | pathogenic | -1.368 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
G/Y | 0.9913 | likely_pathogenic | 0.9889 | pathogenic | -0.836 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.