Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15034 | 45325;45326;45327 | chr2:178621724;178621723;178621722 | chr2:179486451;179486450;179486449 |
N2AB | 13393 | 40402;40403;40404 | chr2:178621724;178621723;178621722 | chr2:179486451;179486450;179486449 |
N2A | 12466 | 37621;37622;37623 | chr2:178621724;178621723;178621722 | chr2:179486451;179486450;179486449 |
N2B | 5969 | 18130;18131;18132 | chr2:178621724;178621723;178621722 | chr2:179486451;179486450;179486449 |
Novex-1 | 6094 | 18505;18506;18507 | chr2:178621724;178621723;178621722 | chr2:179486451;179486450;179486449 |
Novex-2 | 6161 | 18706;18707;18708 | chr2:178621724;178621723;178621722 | chr2:179486451;179486450;179486449 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.981 | D | 0.464 | 0.579 | 0.635921679534 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1314 | likely_benign | 0.1444 | benign | -0.666 | Destabilizing | 0.981 | D | 0.464 | neutral | D | 0.650316825 | None | None | N |
T/C | 0.6097 | likely_pathogenic | 0.6555 | pathogenic | -0.399 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
T/D | 0.6314 | likely_pathogenic | 0.7099 | pathogenic | 0.159 | Stabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/E | 0.4488 | ambiguous | 0.5253 | ambiguous | 0.145 | Stabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
T/F | 0.4083 | ambiguous | 0.4561 | ambiguous | -0.777 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
T/G | 0.3559 | ambiguous | 0.4195 | ambiguous | -0.905 | Destabilizing | 0.997 | D | 0.613 | neutral | None | None | None | None | N |
T/H | 0.4065 | ambiguous | 0.4593 | ambiguous | -1.13 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/I | 0.194 | likely_benign | 0.2334 | benign | -0.131 | Destabilizing | 0.999 | D | 0.74 | deleterious | D | 0.540305241 | None | None | N |
T/K | 0.2784 | likely_benign | 0.3474 | ambiguous | -0.568 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
T/L | 0.107 | likely_benign | 0.1354 | benign | -0.131 | Destabilizing | 0.998 | D | 0.639 | neutral | None | None | None | None | N |
T/M | 0.132 | likely_benign | 0.1393 | benign | 0.052 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
T/N | 0.2024 | likely_benign | 0.2444 | benign | -0.451 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | D | 0.687038432 | None | None | N |
T/P | 0.3271 | likely_benign | 0.3426 | ambiguous | -0.277 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | D | 0.762396423 | None | None | N |
T/Q | 0.297 | likely_benign | 0.3368 | benign | -0.606 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
T/R | 0.2345 | likely_benign | 0.2663 | benign | -0.338 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/S | 0.1511 | likely_benign | 0.1694 | benign | -0.762 | Destabilizing | 0.905 | D | 0.275 | neutral | D | 0.644070135 | None | None | N |
T/V | 0.1635 | likely_benign | 0.1936 | benign | -0.277 | Destabilizing | 0.998 | D | 0.569 | neutral | None | None | None | None | N |
T/W | 0.7587 | likely_pathogenic | 0.7971 | pathogenic | -0.715 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
T/Y | 0.4986 | ambiguous | 0.549 | ambiguous | -0.479 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.