Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15037 | 45334;45335;45336 | chr2:178621715;178621714;178621713 | chr2:179486442;179486441;179486440 |
N2AB | 13396 | 40411;40412;40413 | chr2:178621715;178621714;178621713 | chr2:179486442;179486441;179486440 |
N2A | 12469 | 37630;37631;37632 | chr2:178621715;178621714;178621713 | chr2:179486442;179486441;179486440 |
N2B | 5972 | 18139;18140;18141 | chr2:178621715;178621714;178621713 | chr2:179486442;179486441;179486440 |
Novex-1 | 6097 | 18514;18515;18516 | chr2:178621715;178621714;178621713 | chr2:179486442;179486441;179486440 |
Novex-2 | 6164 | 18715;18716;18717 | chr2:178621715;178621714;178621713 | chr2:179486442;179486441;179486440 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | D | 0.903 | 0.681 | 0.875806401338 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8524 | likely_pathogenic | 0.8833 | pathogenic | -2.198 | Highly Destabilizing | 0.999 | D | 0.674 | neutral | None | None | None | None | N |
L/C | 0.9457 | likely_pathogenic | 0.9552 | pathogenic | -1.448 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
L/D | 0.9969 | likely_pathogenic | 0.997 | pathogenic | -1.898 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/E | 0.9836 | likely_pathogenic | 0.9841 | pathogenic | -1.844 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/F | 0.7109 | likely_pathogenic | 0.7036 | pathogenic | -1.585 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | D | 0.704320392 | None | None | N |
L/G | 0.978 | likely_pathogenic | 0.9832 | pathogenic | -2.595 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/H | 0.9695 | likely_pathogenic | 0.9674 | pathogenic | -1.82 | Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.79670018 | None | None | N |
L/I | 0.2213 | likely_benign | 0.2208 | benign | -1.129 | Destabilizing | 0.999 | D | 0.479 | neutral | D | 0.659255324 | None | None | N |
L/K | 0.9735 | likely_pathogenic | 0.9735 | pathogenic | -1.487 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
L/M | 0.3258 | likely_benign | 0.3177 | benign | -0.855 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
L/N | 0.9813 | likely_pathogenic | 0.9836 | pathogenic | -1.388 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
L/P | 0.8818 | likely_pathogenic | 0.8942 | pathogenic | -1.458 | Destabilizing | 1.0 | D | 0.903 | deleterious | D | 0.547201558 | None | None | N |
L/Q | 0.9432 | likely_pathogenic | 0.9442 | pathogenic | -1.536 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/R | 0.9533 | likely_pathogenic | 0.9531 | pathogenic | -0.915 | Destabilizing | 1.0 | D | 0.89 | deleterious | D | 0.725693872 | None | None | N |
L/S | 0.9709 | likely_pathogenic | 0.9731 | pathogenic | -2.077 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/T | 0.8472 | likely_pathogenic | 0.8605 | pathogenic | -1.898 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
L/V | 0.2932 | likely_benign | 0.293 | benign | -1.458 | Destabilizing | 0.999 | D | 0.459 | neutral | D | 0.705044022 | None | None | N |
L/W | 0.9656 | likely_pathogenic | 0.955 | pathogenic | -1.719 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
L/Y | 0.9784 | likely_pathogenic | 0.9754 | pathogenic | -1.498 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.