Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15039 | 45340;45341;45342 | chr2:178621709;178621708;178621707 | chr2:179486436;179486435;179486434 |
N2AB | 13398 | 40417;40418;40419 | chr2:178621709;178621708;178621707 | chr2:179486436;179486435;179486434 |
N2A | 12471 | 37636;37637;37638 | chr2:178621709;178621708;178621707 | chr2:179486436;179486435;179486434 |
N2B | 5974 | 18145;18146;18147 | chr2:178621709;178621708;178621707 | chr2:179486436;179486435;179486434 |
Novex-1 | 6099 | 18520;18521;18522 | chr2:178621709;178621708;178621707 | chr2:179486436;179486435;179486434 |
Novex-2 | 6166 | 18721;18722;18723 | chr2:178621709;178621708;178621707 | chr2:179486436;179486435;179486434 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.046 | N | 0.204 | 0.304 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
N/K | rs758487494 | 0.356 | 0.939 | D | 0.434 | 0.547 | 0.329282125956 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
N/K | rs758487494 | 0.356 | 0.939 | D | 0.434 | 0.547 | 0.329282125956 | gnomAD-4.0.0 | 1.59571E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43554E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2725 | likely_benign | 0.2976 | benign | -0.179 | Destabilizing | 0.953 | D | 0.469 | neutral | None | None | None | None | N |
N/C | 0.5676 | likely_pathogenic | 0.5691 | pathogenic | 0.296 | Stabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | N |
N/D | 0.0866 | likely_benign | 0.1015 | benign | 0.176 | Stabilizing | 0.046 | N | 0.204 | neutral | N | 0.474258825 | None | None | N |
N/E | 0.4582 | ambiguous | 0.5174 | ambiguous | 0.141 | Stabilizing | 0.91 | D | 0.411 | neutral | None | None | None | None | N |
N/F | 0.7874 | likely_pathogenic | 0.7993 | pathogenic | -0.583 | Destabilizing | 0.993 | D | 0.647 | neutral | None | None | None | None | N |
N/G | 0.2925 | likely_benign | 0.3085 | benign | -0.344 | Destabilizing | 0.953 | D | 0.425 | neutral | None | None | None | None | N |
N/H | 0.1958 | likely_benign | 0.2116 | benign | -0.365 | Destabilizing | 0.1 | N | 0.285 | neutral | D | 0.547898631 | None | None | N |
N/I | 0.4538 | ambiguous | 0.476 | ambiguous | 0.162 | Stabilizing | 0.991 | D | 0.645 | neutral | D | 0.639296068 | None | None | N |
N/K | 0.4866 | ambiguous | 0.576 | pathogenic | 0.146 | Stabilizing | 0.939 | D | 0.434 | neutral | D | 0.640643099 | None | None | N |
N/L | 0.447 | ambiguous | 0.4697 | ambiguous | 0.162 | Stabilizing | 0.993 | D | 0.606 | neutral | None | None | None | None | N |
N/M | 0.5645 | likely_pathogenic | 0.5845 | pathogenic | 0.33 | Stabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | N |
N/P | 0.4101 | ambiguous | 0.44 | ambiguous | 0.075 | Stabilizing | 0.993 | D | 0.607 | neutral | None | None | None | None | N |
N/Q | 0.4799 | ambiguous | 0.5423 | ambiguous | -0.296 | Destabilizing | 0.993 | D | 0.463 | neutral | None | None | None | None | N |
N/R | 0.5277 | ambiguous | 0.5978 | pathogenic | 0.174 | Stabilizing | 0.993 | D | 0.455 | neutral | None | None | None | None | N |
N/S | 0.0914 | likely_benign | 0.0911 | benign | -0.08 | Destabilizing | 0.939 | D | 0.453 | neutral | N | 0.484505094 | None | None | N |
N/T | 0.2053 | likely_benign | 0.2284 | benign | 0.026 | Stabilizing | 0.969 | D | 0.432 | neutral | D | 0.548280043 | None | None | N |
N/V | 0.4041 | ambiguous | 0.4209 | ambiguous | 0.075 | Stabilizing | 0.993 | D | 0.629 | neutral | None | None | None | None | N |
N/W | 0.9079 | likely_pathogenic | 0.9179 | pathogenic | -0.612 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
N/Y | 0.3403 | ambiguous | 0.3677 | ambiguous | -0.318 | Destabilizing | 0.982 | D | 0.608 | neutral | D | 0.639296068 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.