Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15045 | 45358;45359;45360 | chr2:178621691;178621690;178621689 | chr2:179486418;179486417;179486416 |
N2AB | 13404 | 40435;40436;40437 | chr2:178621691;178621690;178621689 | chr2:179486418;179486417;179486416 |
N2A | 12477 | 37654;37655;37656 | chr2:178621691;178621690;178621689 | chr2:179486418;179486417;179486416 |
N2B | 5980 | 18163;18164;18165 | chr2:178621691;178621690;178621689 | chr2:179486418;179486417;179486416 |
Novex-1 | 6105 | 18538;18539;18540 | chr2:178621691;178621690;178621689 | chr2:179486418;179486417;179486416 |
Novex-2 | 6172 | 18739;18740;18741 | chr2:178621691;178621690;178621689 | chr2:179486418;179486417;179486416 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.027 | D | 0.403 | 0.135 | 0.208816687407 | gnomAD-4.0.0 | 1.5949E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86346E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1026 | likely_benign | 0.1154 | benign | -0.391 | Destabilizing | 0.027 | N | 0.403 | neutral | D | 0.546602554 | None | None | N |
T/C | 0.6556 | likely_pathogenic | 0.6947 | pathogenic | -0.021 | Destabilizing | 0.935 | D | 0.565 | neutral | None | None | None | None | N |
T/D | 0.3451 | ambiguous | 0.405 | ambiguous | -0.301 | Destabilizing | 0.081 | N | 0.477 | neutral | None | None | None | None | N |
T/E | 0.3086 | likely_benign | 0.3642 | ambiguous | -0.387 | Destabilizing | 0.149 | N | 0.457 | neutral | None | None | None | None | N |
T/F | 0.3776 | ambiguous | 0.4546 | ambiguous | -0.939 | Destabilizing | 0.791 | D | 0.59 | neutral | None | None | None | None | N |
T/G | 0.2339 | likely_benign | 0.2473 | benign | -0.516 | Destabilizing | None | N | 0.322 | neutral | None | None | None | None | N |
T/H | 0.3453 | ambiguous | 0.3952 | ambiguous | -0.918 | Destabilizing | 0.555 | D | 0.594 | neutral | None | None | None | None | N |
T/I | 0.3333 | likely_benign | 0.4165 | ambiguous | -0.175 | Destabilizing | 0.484 | N | 0.539 | neutral | D | 0.548472214 | None | None | N |
T/K | 0.2111 | likely_benign | 0.2558 | benign | -0.34 | Destabilizing | 0.062 | N | 0.443 | neutral | N | 0.453229929 | None | None | N |
T/L | 0.17 | likely_benign | 0.2069 | benign | -0.175 | Destabilizing | 0.149 | N | 0.481 | neutral | None | None | None | None | N |
T/M | 0.1033 | likely_benign | 0.1149 | benign | 0.295 | Stabilizing | 0.791 | D | 0.561 | neutral | None | None | None | None | N |
T/N | 0.1041 | likely_benign | 0.1189 | benign | -0.076 | Destabilizing | 0.001 | N | 0.319 | neutral | None | None | None | None | N |
T/P | 0.2924 | likely_benign | 0.3838 | ambiguous | -0.22 | Destabilizing | 0.484 | N | 0.543 | neutral | N | 0.504327812 | None | None | N |
T/Q | 0.2608 | likely_benign | 0.3004 | benign | -0.416 | Destabilizing | 0.38 | N | 0.542 | neutral | None | None | None | None | N |
T/R | 0.1814 | likely_benign | 0.2248 | benign | 0.013 | Stabilizing | None | N | 0.389 | neutral | N | 0.461301154 | None | None | N |
T/S | 0.122 | likely_benign | 0.1368 | benign | -0.226 | Destabilizing | 0.001 | N | 0.259 | neutral | N | 0.465285498 | None | None | N |
T/V | 0.2799 | likely_benign | 0.3394 | benign | -0.22 | Destabilizing | 0.149 | N | 0.361 | neutral | None | None | None | None | N |
T/W | 0.6638 | likely_pathogenic | 0.7371 | pathogenic | -0.933 | Destabilizing | 0.935 | D | 0.605 | neutral | None | None | None | None | N |
T/Y | 0.3721 | ambiguous | 0.4448 | ambiguous | -0.652 | Destabilizing | 0.791 | D | 0.591 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.