Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15047 | 45364;45365;45366 | chr2:178621685;178621684;178621683 | chr2:179486412;179486411;179486410 |
N2AB | 13406 | 40441;40442;40443 | chr2:178621685;178621684;178621683 | chr2:179486412;179486411;179486410 |
N2A | 12479 | 37660;37661;37662 | chr2:178621685;178621684;178621683 | chr2:179486412;179486411;179486410 |
N2B | 5982 | 18169;18170;18171 | chr2:178621685;178621684;178621683 | chr2:179486412;179486411;179486410 |
Novex-1 | 6107 | 18544;18545;18546 | chr2:178621685;178621684;178621683 | chr2:179486412;179486411;179486410 |
Novex-2 | 6174 | 18745;18746;18747 | chr2:178621685;178621684;178621683 | chr2:179486412;179486411;179486410 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | rs764583221 | -0.441 | 0.966 | N | 0.375 | 0.565 | 0.467923293426 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/P | rs764583221 | -0.441 | 0.966 | N | 0.375 | 0.565 | 0.467923293426 | gnomAD-4.0.0 | 1.59476E-06 | None | None | None | None | N | None | 0 | 2.29389E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0862 | likely_benign | 0.088 | benign | -0.638 | Destabilizing | 0.454 | N | 0.348 | neutral | N | 0.50581697 | None | None | N |
T/C | 0.5827 | likely_pathogenic | 0.6327 | pathogenic | -0.414 | Destabilizing | 0.998 | D | 0.36 | neutral | None | None | None | None | N |
T/D | 0.3574 | ambiguous | 0.3671 | ambiguous | 0.142 | Stabilizing | 0.728 | D | 0.336 | neutral | None | None | None | None | N |
T/E | 0.3203 | likely_benign | 0.329 | benign | 0.13 | Stabilizing | 0.842 | D | 0.325 | neutral | None | None | None | None | N |
T/F | 0.3243 | likely_benign | 0.3477 | ambiguous | -0.801 | Destabilizing | 0.991 | D | 0.462 | neutral | None | None | None | None | N |
T/G | 0.2869 | likely_benign | 0.3151 | benign | -0.873 | Destabilizing | 0.525 | D | 0.401 | neutral | None | None | None | None | N |
T/H | 0.3158 | likely_benign | 0.3273 | benign | -1.119 | Destabilizing | 0.974 | D | 0.45 | neutral | None | None | None | None | N |
T/I | 0.2035 | likely_benign | 0.2116 | benign | -0.113 | Destabilizing | 0.966 | D | 0.377 | neutral | D | 0.595204997 | None | None | N |
T/K | 0.237 | likely_benign | 0.2393 | benign | -0.561 | Destabilizing | 0.842 | D | 0.319 | neutral | None | None | None | None | N |
T/L | 0.1434 | likely_benign | 0.1513 | benign | -0.113 | Destabilizing | 0.915 | D | 0.317 | neutral | None | None | None | None | N |
T/M | 0.1107 | likely_benign | 0.1177 | benign | 0.034 | Stabilizing | 0.998 | D | 0.351 | neutral | None | None | None | None | N |
T/N | 0.1085 | likely_benign | 0.1174 | benign | -0.466 | Destabilizing | 0.005 | N | 0.127 | neutral | N | 0.506268532 | None | None | N |
T/P | 0.1547 | likely_benign | 0.1506 | benign | -0.255 | Destabilizing | 0.966 | D | 0.375 | neutral | N | 0.51280061 | None | None | N |
T/Q | 0.2652 | likely_benign | 0.2761 | benign | -0.597 | Destabilizing | 0.974 | D | 0.379 | neutral | None | None | None | None | N |
T/R | 0.1881 | likely_benign | 0.1895 | benign | -0.352 | Destabilizing | 0.949 | D | 0.357 | neutral | None | None | None | None | N |
T/S | 0.1106 | likely_benign | 0.1187 | benign | -0.755 | Destabilizing | 0.062 | N | 0.123 | neutral | N | 0.463188494 | None | None | N |
T/V | 0.1665 | likely_benign | 0.1788 | benign | -0.255 | Destabilizing | 0.915 | D | 0.297 | neutral | None | None | None | None | N |
T/W | 0.7192 | likely_pathogenic | 0.7412 | pathogenic | -0.763 | Destabilizing | 0.998 | D | 0.579 | neutral | None | None | None | None | N |
T/Y | 0.3369 | likely_benign | 0.3671 | ambiguous | -0.51 | Destabilizing | 0.991 | D | 0.458 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.