Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1505 | 4738;4739;4740 | chr2:178777552;178777551;178777550 | chr2:179642279;179642278;179642277 |
N2AB | 1505 | 4738;4739;4740 | chr2:178777552;178777551;178777550 | chr2:179642279;179642278;179642277 |
N2A | 1505 | 4738;4739;4740 | chr2:178777552;178777551;178777550 | chr2:179642279;179642278;179642277 |
N2B | 1459 | 4600;4601;4602 | chr2:178777552;178777551;178777550 | chr2:179642279;179642278;179642277 |
Novex-1 | 1459 | 4600;4601;4602 | chr2:178777552;178777551;178777550 | chr2:179642279;179642278;179642277 |
Novex-2 | 1459 | 4600;4601;4602 | chr2:178777552;178777551;178777550 | chr2:179642279;179642278;179642277 |
Novex-3 | 1505 | 4738;4739;4740 | chr2:178777552;178777551;178777550 | chr2:179642279;179642278;179642277 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs756907114 | -0.321 | 0.004 | N | 0.261 | 0.084 | 0.508755544265 | gnomAD-2.1.1 | 7.97E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
V/L | rs756907114 | -0.321 | 0.004 | N | 0.261 | 0.084 | 0.508755544265 | gnomAD-4.0.0 | 1.43674E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79871E-05 | 0 | 1.65612E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4616 | ambiguous | 0.467 | ambiguous | -1.507 | Destabilizing | 0.052 | N | 0.335 | neutral | N | 0.506840401 | None | None | I |
V/C | 0.9349 | likely_pathogenic | 0.9282 | pathogenic | -0.979 | Destabilizing | 0.935 | D | 0.487 | neutral | None | None | None | None | I |
V/D | 0.8588 | likely_pathogenic | 0.8569 | pathogenic | -1.13 | Destabilizing | 0.555 | D | 0.614 | neutral | None | None | None | None | I |
V/E | 0.7042 | likely_pathogenic | 0.7017 | pathogenic | -1.071 | Destabilizing | 0.484 | N | 0.559 | neutral | D | 0.524538714 | None | None | I |
V/F | 0.3567 | ambiguous | 0.3589 | ambiguous | -1.005 | Destabilizing | 0.38 | N | 0.471 | neutral | None | None | None | None | I |
V/G | 0.6267 | likely_pathogenic | 0.6369 | pathogenic | -1.889 | Destabilizing | 0.484 | N | 0.59 | neutral | D | 0.580654639 | None | None | I |
V/H | 0.9043 | likely_pathogenic | 0.9081 | pathogenic | -1.393 | Destabilizing | 0.935 | D | 0.645 | neutral | None | None | None | None | I |
V/I | 0.0864 | likely_benign | 0.0872 | benign | -0.535 | Destabilizing | None | N | 0.153 | neutral | N | 0.389791108 | None | None | I |
V/K | 0.7955 | likely_pathogenic | 0.8049 | pathogenic | -1.233 | Destabilizing | 0.555 | D | 0.562 | neutral | None | None | None | None | I |
V/L | 0.286 | likely_benign | 0.3002 | benign | -0.535 | Destabilizing | 0.004 | N | 0.261 | neutral | N | 0.492195058 | None | None | I |
V/M | 0.1814 | likely_benign | 0.1826 | benign | -0.428 | Destabilizing | 0.38 | N | 0.462 | neutral | None | None | None | None | I |
V/N | 0.7411 | likely_pathogenic | 0.7449 | pathogenic | -1.107 | Destabilizing | 0.791 | D | 0.637 | neutral | None | None | None | None | I |
V/P | 0.9487 | likely_pathogenic | 0.9494 | pathogenic | -0.824 | Destabilizing | 0.791 | D | 0.582 | neutral | None | None | None | None | I |
V/Q | 0.7335 | likely_pathogenic | 0.7378 | pathogenic | -1.166 | Destabilizing | 0.791 | D | 0.593 | neutral | None | None | None | None | I |
V/R | 0.7637 | likely_pathogenic | 0.7726 | pathogenic | -0.82 | Destabilizing | 0.555 | D | 0.635 | neutral | None | None | None | None | I |
V/S | 0.6426 | likely_pathogenic | 0.6469 | pathogenic | -1.717 | Destabilizing | 0.555 | D | 0.535 | neutral | None | None | None | None | I |
V/T | 0.428 | ambiguous | 0.4243 | ambiguous | -1.53 | Destabilizing | 0.149 | N | 0.38 | neutral | None | None | None | None | I |
V/W | 0.9313 | likely_pathogenic | 0.9345 | pathogenic | -1.258 | Destabilizing | 0.935 | D | 0.685 | prob.neutral | None | None | None | None | I |
V/Y | 0.8306 | likely_pathogenic | 0.8254 | pathogenic | -0.936 | Destabilizing | 0.555 | D | 0.483 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.