Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15054 | 45385;45386;45387 | chr2:178621664;178621663;178621662 | chr2:179486391;179486390;179486389 |
N2AB | 13413 | 40462;40463;40464 | chr2:178621664;178621663;178621662 | chr2:179486391;179486390;179486389 |
N2A | 12486 | 37681;37682;37683 | chr2:178621664;178621663;178621662 | chr2:179486391;179486390;179486389 |
N2B | 5989 | 18190;18191;18192 | chr2:178621664;178621663;178621662 | chr2:179486391;179486390;179486389 |
Novex-1 | 6114 | 18565;18566;18567 | chr2:178621664;178621663;178621662 | chr2:179486391;179486390;179486389 |
Novex-2 | 6181 | 18766;18767;18768 | chr2:178621664;178621663;178621662 | chr2:179486391;179486390;179486389 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.999 | D | 0.856 | 0.75 | 0.874876458758 | gnomAD-4.0.0 | 1.59419E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43345E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7079 | likely_pathogenic | 0.6928 | pathogenic | -2.4 | Highly Destabilizing | 0.977 | D | 0.581 | neutral | D | 0.534177785 | None | None | N |
V/C | 0.9617 | likely_pathogenic | 0.9715 | pathogenic | -2.306 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
V/D | 0.9736 | likely_pathogenic | 0.9699 | pathogenic | -3.41 | Highly Destabilizing | 0.999 | D | 0.862 | deleterious | D | 0.785088835 | None | None | N |
V/E | 0.9547 | likely_pathogenic | 0.9517 | pathogenic | -3.19 | Highly Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
V/F | 0.6923 | likely_pathogenic | 0.6924 | pathogenic | -1.302 | Destabilizing | 0.993 | D | 0.845 | deleterious | D | 0.66754836 | None | None | N |
V/G | 0.7464 | likely_pathogenic | 0.7384 | pathogenic | -2.895 | Highly Destabilizing | 0.999 | D | 0.856 | deleterious | D | 0.711420145 | None | None | N |
V/H | 0.9918 | likely_pathogenic | 0.9914 | pathogenic | -2.472 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
V/I | 0.1112 | likely_benign | 0.1223 | benign | -0.999 | Destabilizing | 0.117 | N | 0.301 | neutral | N | 0.520464316 | None | None | N |
V/K | 0.9832 | likely_pathogenic | 0.9836 | pathogenic | -1.941 | Destabilizing | 0.998 | D | 0.856 | deleterious | None | None | None | None | N |
V/L | 0.4697 | ambiguous | 0.6446 | pathogenic | -0.999 | Destabilizing | 0.898 | D | 0.587 | neutral | N | 0.494938305 | None | None | N |
V/M | 0.5468 | ambiguous | 0.5844 | pathogenic | -1.38 | Destabilizing | 0.995 | D | 0.797 | deleterious | None | None | None | None | N |
V/N | 0.9467 | likely_pathogenic | 0.9409 | pathogenic | -2.397 | Highly Destabilizing | 0.999 | D | 0.889 | deleterious | None | None | None | None | N |
V/P | 0.9775 | likely_pathogenic | 0.9795 | pathogenic | -1.444 | Destabilizing | 0.999 | D | 0.862 | deleterious | None | None | None | None | N |
V/Q | 0.9766 | likely_pathogenic | 0.9759 | pathogenic | -2.235 | Highly Destabilizing | 0.999 | D | 0.888 | deleterious | None | None | None | None | N |
V/R | 0.9745 | likely_pathogenic | 0.9757 | pathogenic | -1.74 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
V/S | 0.8867 | likely_pathogenic | 0.8665 | pathogenic | -2.925 | Highly Destabilizing | 0.998 | D | 0.846 | deleterious | None | None | None | None | N |
V/T | 0.7123 | likely_pathogenic | 0.7098 | pathogenic | -2.575 | Highly Destabilizing | 0.983 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/W | 0.9945 | likely_pathogenic | 0.9949 | pathogenic | -1.792 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
V/Y | 0.9633 | likely_pathogenic | 0.9623 | pathogenic | -1.535 | Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.