Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15055 | 45388;45389;45390 | chr2:178621661;178621660;178621659 | chr2:179486388;179486387;179486386 |
N2AB | 13414 | 40465;40466;40467 | chr2:178621661;178621660;178621659 | chr2:179486388;179486387;179486386 |
N2A | 12487 | 37684;37685;37686 | chr2:178621661;178621660;178621659 | chr2:179486388;179486387;179486386 |
N2B | 5990 | 18193;18194;18195 | chr2:178621661;178621660;178621659 | chr2:179486388;179486387;179486386 |
Novex-1 | 6115 | 18568;18569;18570 | chr2:178621661;178621660;178621659 | chr2:179486388;179486387;179486386 |
Novex-2 | 6182 | 18769;18770;18771 | chr2:178621661;178621660;178621659 | chr2:179486388;179486387;179486386 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 1.0 | D | 0.693 | 0.611 | 0.633466640759 | gnomAD-4.0.0 | 1.36951E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79989E-06 | 0 | 0 |
S/T | None | None | 0.999 | D | 0.397 | 0.408 | 0.505335117028 | gnomAD-4.0.0 | 6.84754E-07 | None | None | None | None | N | None | 2.99491E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2566 | likely_benign | 0.2283 | benign | -0.467 | Destabilizing | 0.997 | D | 0.355 | neutral | D | 0.604560188 | None | None | N |
S/C | 0.5758 | likely_pathogenic | 0.5637 | ambiguous | -0.406 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | D | 0.755048767 | None | None | N |
S/D | 0.7593 | likely_pathogenic | 0.7805 | pathogenic | -0.233 | Destabilizing | 0.999 | D | 0.545 | neutral | None | None | None | None | N |
S/E | 0.9045 | likely_pathogenic | 0.8937 | pathogenic | -0.262 | Destabilizing | 0.999 | D | 0.541 | neutral | None | None | None | None | N |
S/F | 0.8139 | likely_pathogenic | 0.7649 | pathogenic | -0.64 | Destabilizing | 1.0 | D | 0.753 | deleterious | D | 0.671656969 | None | None | N |
S/G | 0.2266 | likely_benign | 0.2238 | benign | -0.697 | Destabilizing | 0.999 | D | 0.425 | neutral | None | None | None | None | N |
S/H | 0.8582 | likely_pathogenic | 0.849 | pathogenic | -1.202 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
S/I | 0.7345 | likely_pathogenic | 0.6812 | pathogenic | 0.027 | Stabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
S/K | 0.9702 | likely_pathogenic | 0.9627 | pathogenic | -0.843 | Destabilizing | 0.999 | D | 0.539 | neutral | None | None | None | None | N |
S/L | 0.4371 | ambiguous | 0.383 | ambiguous | 0.027 | Stabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
S/M | 0.6733 | likely_pathogenic | 0.6382 | pathogenic | 0.198 | Stabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
S/N | 0.3637 | ambiguous | 0.387 | ambiguous | -0.682 | Destabilizing | 0.999 | D | 0.506 | neutral | None | None | None | None | N |
S/P | 0.9284 | likely_pathogenic | 0.8886 | pathogenic | -0.103 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | D | 0.604656531 | None | None | N |
S/Q | 0.8898 | likely_pathogenic | 0.8828 | pathogenic | -0.836 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
S/R | 0.9493 | likely_pathogenic | 0.9354 | pathogenic | -0.688 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
S/T | 0.1807 | likely_benign | 0.1777 | benign | -0.686 | Destabilizing | 0.999 | D | 0.397 | neutral | D | 0.548472214 | None | None | N |
S/V | 0.7194 | likely_pathogenic | 0.6822 | pathogenic | -0.103 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
S/W | 0.8579 | likely_pathogenic | 0.8315 | pathogenic | -0.662 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
S/Y | 0.7284 | likely_pathogenic | 0.6959 | pathogenic | -0.407 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.716135924 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.