Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15057 | 45394;45395;45396 | chr2:178621655;178621654;178621653 | chr2:179486382;179486381;179486380 |
N2AB | 13416 | 40471;40472;40473 | chr2:178621655;178621654;178621653 | chr2:179486382;179486381;179486380 |
N2A | 12489 | 37690;37691;37692 | chr2:178621655;178621654;178621653 | chr2:179486382;179486381;179486380 |
N2B | 5992 | 18199;18200;18201 | chr2:178621655;178621654;178621653 | chr2:179486382;179486381;179486380 |
Novex-1 | 6117 | 18574;18575;18576 | chr2:178621655;178621654;178621653 | chr2:179486382;179486381;179486380 |
Novex-2 | 6184 | 18775;18776;18777 | chr2:178621655;178621654;178621653 | chr2:179486382;179486381;179486380 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.987 | D | 0.648 | 0.62 | 0.50466331119 | gnomAD-4.0.0 | 6.84736E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99947E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0708 | likely_benign | 0.0698 | benign | -0.502 | Destabilizing | 0.117 | N | 0.338 | neutral | D | 0.536685617 | None | None | N |
P/C | 0.7053 | likely_pathogenic | 0.7248 | pathogenic | -0.672 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
P/D | 0.3698 | ambiguous | 0.4549 | ambiguous | 0.102 | Stabilizing | 0.998 | D | 0.663 | neutral | None | None | None | None | N |
P/E | 0.2507 | likely_benign | 0.2839 | benign | -0.005 | Destabilizing | 0.995 | D | 0.685 | prob.neutral | None | None | None | None | N |
P/F | 0.5397 | ambiguous | 0.5655 | pathogenic | -0.691 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
P/G | 0.3146 | likely_benign | 0.3477 | ambiguous | -0.637 | Destabilizing | 0.966 | D | 0.619 | neutral | None | None | None | None | N |
P/H | 0.2524 | likely_benign | 0.2621 | benign | -0.206 | Destabilizing | 1.0 | D | 0.671 | neutral | D | 0.734752435 | None | None | N |
P/I | 0.2799 | likely_benign | 0.2949 | benign | -0.297 | Destabilizing | 0.995 | D | 0.689 | prob.neutral | None | None | None | None | N |
P/K | 0.3346 | likely_benign | 0.3601 | ambiguous | -0.303 | Destabilizing | 0.995 | D | 0.688 | prob.neutral | None | None | None | None | N |
P/L | 0.12 | likely_benign | 0.1268 | benign | -0.297 | Destabilizing | 0.993 | D | 0.668 | neutral | D | 0.734752435 | None | None | N |
P/M | 0.2972 | likely_benign | 0.3302 | benign | -0.313 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
P/N | 0.2932 | likely_benign | 0.3434 | ambiguous | -0.07 | Destabilizing | 0.998 | D | 0.668 | neutral | None | None | None | None | N |
P/Q | 0.1635 | likely_benign | 0.1728 | benign | -0.297 | Destabilizing | 0.998 | D | 0.684 | prob.neutral | None | None | None | None | N |
P/R | 0.248 | likely_benign | 0.2557 | benign | 0.145 | Stabilizing | 0.997 | D | 0.665 | neutral | D | 0.746422892 | None | None | N |
P/S | 0.1199 | likely_benign | 0.1247 | benign | -0.52 | Destabilizing | 0.987 | D | 0.648 | neutral | D | 0.665143119 | None | None | N |
P/T | 0.094 | likely_benign | 0.0965 | benign | -0.521 | Destabilizing | 0.993 | D | 0.681 | prob.neutral | D | 0.675801391 | None | None | N |
P/V | 0.1948 | likely_benign | 0.2098 | benign | -0.33 | Destabilizing | 0.99 | D | 0.643 | neutral | None | None | None | None | N |
P/W | 0.6982 | likely_pathogenic | 0.7415 | pathogenic | -0.745 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
P/Y | 0.4984 | ambiguous | 0.5352 | ambiguous | -0.436 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.