Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15065 | 45418;45419;45420 | chr2:178621631;178621630;178621629 | chr2:179486358;179486357;179486356 |
N2AB | 13424 | 40495;40496;40497 | chr2:178621631;178621630;178621629 | chr2:179486358;179486357;179486356 |
N2A | 12497 | 37714;37715;37716 | chr2:178621631;178621630;178621629 | chr2:179486358;179486357;179486356 |
N2B | 6000 | 18223;18224;18225 | chr2:178621631;178621630;178621629 | chr2:179486358;179486357;179486356 |
Novex-1 | 6125 | 18598;18599;18600 | chr2:178621631;178621630;178621629 | chr2:179486358;179486357;179486356 |
Novex-2 | 6192 | 18799;18800;18801 | chr2:178621631;178621630;178621629 | chr2:179486358;179486357;179486356 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs776374474 | -0.692 | 0.884 | D | 0.312 | 0.515 | 0.395441342475 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.62E-05 | None | 0 | None | 0 | 0 | 0 |
K/R | rs776374474 | -0.692 | 0.884 | D | 0.312 | 0.515 | 0.395441342475 | gnomAD-4.0.0 | 1.59378E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78381E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8788 | likely_pathogenic | 0.8868 | pathogenic | -1.093 | Destabilizing | 0.998 | D | 0.594 | neutral | None | None | None | None | N |
K/C | 0.9046 | likely_pathogenic | 0.9411 | pathogenic | -1.057 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
K/D | 0.9705 | likely_pathogenic | 0.9742 | pathogenic | -0.413 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
K/E | 0.7184 | likely_pathogenic | 0.7063 | pathogenic | -0.221 | Destabilizing | 0.996 | D | 0.511 | neutral | D | 0.82509512 | None | None | N |
K/F | 0.9558 | likely_pathogenic | 0.9572 | pathogenic | -0.671 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
K/G | 0.941 | likely_pathogenic | 0.9524 | pathogenic | -1.523 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/H | 0.5793 | likely_pathogenic | 0.6392 | pathogenic | -1.766 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
K/I | 0.7971 | likely_pathogenic | 0.7832 | pathogenic | 0.067 | Stabilizing | 1.0 | D | 0.843 | deleterious | D | 0.757162329 | None | None | N |
K/L | 0.7637 | likely_pathogenic | 0.7722 | pathogenic | 0.067 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/M | 0.6718 | likely_pathogenic | 0.6469 | pathogenic | -0.066 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
K/N | 0.9091 | likely_pathogenic | 0.9086 | pathogenic | -0.91 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | D | 0.713205174 | None | None | N |
K/P | 0.9953 | likely_pathogenic | 0.9958 | pathogenic | -0.292 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
K/Q | 0.3871 | ambiguous | 0.3918 | ambiguous | -0.832 | Destabilizing | 0.999 | D | 0.673 | neutral | D | 0.690885556 | None | None | N |
K/R | 0.0894 | likely_benign | 0.106 | benign | -0.736 | Destabilizing | 0.884 | D | 0.312 | neutral | D | 0.545647116 | None | None | N |
K/S | 0.9108 | likely_pathogenic | 0.9142 | pathogenic | -1.675 | Destabilizing | 0.998 | D | 0.547 | neutral | None | None | None | None | N |
K/T | 0.7815 | likely_pathogenic | 0.7655 | pathogenic | -1.233 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | D | 0.734631692 | None | None | N |
K/V | 0.7879 | likely_pathogenic | 0.7892 | pathogenic | -0.292 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
K/W | 0.9338 | likely_pathogenic | 0.9517 | pathogenic | -0.518 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
K/Y | 0.8913 | likely_pathogenic | 0.9128 | pathogenic | -0.214 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.