Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15068 | 45427;45428;45429 | chr2:178621622;178621621;178621620 | chr2:179486349;179486348;179486347 |
N2AB | 13427 | 40504;40505;40506 | chr2:178621622;178621621;178621620 | chr2:179486349;179486348;179486347 |
N2A | 12500 | 37723;37724;37725 | chr2:178621622;178621621;178621620 | chr2:179486349;179486348;179486347 |
N2B | 6003 | 18232;18233;18234 | chr2:178621622;178621621;178621620 | chr2:179486349;179486348;179486347 |
Novex-1 | 6128 | 18607;18608;18609 | chr2:178621622;178621621;178621620 | chr2:179486349;179486348;179486347 |
Novex-2 | 6195 | 18808;18809;18810 | chr2:178621622;178621621;178621620 | chr2:179486349;179486348;179486347 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs2058292632 | None | 0.565 | N | 0.499 | 0.252 | 0.384419519794 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs2058292632 | None | 0.565 | N | 0.499 | 0.252 | 0.384419519794 | gnomAD-4.0.0 | 1.55046E-05 | None | None | None | None | N | None | 4.01102E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.86579E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1725 | likely_benign | 0.1546 | benign | -0.371 | Destabilizing | 0.565 | D | 0.475 | neutral | N | 0.510046502 | None | None | N |
E/C | 0.8553 | likely_pathogenic | 0.8552 | pathogenic | -0.25 | Destabilizing | 0.996 | D | 0.563 | neutral | None | None | None | None | N |
E/D | 0.1419 | likely_benign | 0.1345 | benign | -0.395 | Destabilizing | 0.008 | N | 0.211 | neutral | D | 0.542818331 | None | None | N |
E/F | 0.7554 | likely_pathogenic | 0.7285 | pathogenic | -0.156 | Destabilizing | 0.961 | D | 0.54 | neutral | None | None | None | None | N |
E/G | 0.2023 | likely_benign | 0.1798 | benign | -0.572 | Destabilizing | 0.722 | D | 0.484 | neutral | D | 0.557152062 | None | None | N |
E/H | 0.4492 | ambiguous | 0.4158 | ambiguous | 0.216 | Stabilizing | 0.961 | D | 0.421 | neutral | None | None | None | None | N |
E/I | 0.3313 | likely_benign | 0.3049 | benign | 0.127 | Stabilizing | 0.858 | D | 0.507 | neutral | None | None | None | None | N |
E/K | 0.1097 | likely_benign | 0.0887 | benign | 0.203 | Stabilizing | 0.565 | D | 0.499 | neutral | N | 0.499072437 | None | None | N |
E/L | 0.422 | ambiguous | 0.4014 | ambiguous | 0.127 | Stabilizing | 0.633 | D | 0.499 | neutral | None | None | None | None | N |
E/M | 0.4199 | ambiguous | 0.4001 | ambiguous | 0.076 | Stabilizing | 0.989 | D | 0.506 | neutral | None | None | None | None | N |
E/N | 0.2494 | likely_benign | 0.2123 | benign | -0.197 | Destabilizing | 0.858 | D | 0.412 | neutral | None | None | None | None | N |
E/P | 0.9227 | likely_pathogenic | 0.9215 | pathogenic | -0.019 | Destabilizing | 0.961 | D | 0.471 | neutral | None | None | None | None | N |
E/Q | 0.1346 | likely_benign | 0.1209 | benign | -0.141 | Destabilizing | 0.092 | N | 0.241 | neutral | N | 0.490789755 | None | None | N |
E/R | 0.1972 | likely_benign | 0.1765 | benign | 0.512 | Stabilizing | 0.923 | D | 0.411 | neutral | None | None | None | None | N |
E/S | 0.2192 | likely_benign | 0.1938 | benign | -0.344 | Destabilizing | 0.633 | D | 0.433 | neutral | None | None | None | None | N |
E/T | 0.1937 | likely_benign | 0.1697 | benign | -0.176 | Destabilizing | 0.775 | D | 0.469 | neutral | None | None | None | None | N |
E/V | 0.2091 | likely_benign | 0.1932 | benign | -0.019 | Destabilizing | 0.018 | N | 0.29 | neutral | N | 0.510163456 | None | None | N |
E/W | 0.8836 | likely_pathogenic | 0.8747 | pathogenic | 0.011 | Stabilizing | 0.996 | D | 0.617 | neutral | None | None | None | None | N |
E/Y | 0.6199 | likely_pathogenic | 0.6067 | pathogenic | 0.084 | Stabilizing | 0.987 | D | 0.514 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.