Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15080 | 45463;45464;45465 | chr2:178621586;178621585;178621584 | chr2:179486313;179486312;179486311 |
N2AB | 13439 | 40540;40541;40542 | chr2:178621586;178621585;178621584 | chr2:179486313;179486312;179486311 |
N2A | 12512 | 37759;37760;37761 | chr2:178621586;178621585;178621584 | chr2:179486313;179486312;179486311 |
N2B | 6015 | 18268;18269;18270 | chr2:178621586;178621585;178621584 | chr2:179486313;179486312;179486311 |
Novex-1 | 6140 | 18643;18644;18645 | chr2:178621586;178621585;178621584 | chr2:179486313;179486312;179486311 |
Novex-2 | 6207 | 18844;18845;18846 | chr2:178621586;178621585;178621584 | chr2:179486313;179486312;179486311 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.096 | N | 0.469 | 0.093 | 0.262175524916 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0715 | likely_benign | 0.0748 | benign | -0.582 | Destabilizing | None | N | 0.224 | neutral | N | 0.445992301 | None | None | N |
T/C | 0.3611 | ambiguous | 0.4549 | ambiguous | -0.407 | Destabilizing | 0.667 | D | 0.501 | neutral | None | None | None | None | N |
T/D | 0.2587 | likely_benign | 0.2943 | benign | 0.281 | Stabilizing | 0.22 | N | 0.474 | neutral | None | None | None | None | N |
T/E | 0.2063 | likely_benign | 0.2232 | benign | 0.244 | Stabilizing | 0.124 | N | 0.471 | neutral | None | None | None | None | N |
T/F | 0.2161 | likely_benign | 0.236 | benign | -0.857 | Destabilizing | 0.331 | N | 0.583 | neutral | None | None | None | None | N |
T/G | 0.1832 | likely_benign | 0.2159 | benign | -0.778 | Destabilizing | 0.055 | N | 0.563 | neutral | None | None | None | None | N |
T/H | 0.2091 | likely_benign | 0.2269 | benign | -1.049 | Destabilizing | 0.667 | D | 0.579 | neutral | None | None | None | None | N |
T/I | 0.1452 | likely_benign | 0.137 | benign | -0.172 | Destabilizing | 0.096 | N | 0.469 | neutral | N | 0.511568433 | None | None | N |
T/K | 0.1735 | likely_benign | 0.1743 | benign | -0.467 | Destabilizing | 0.001 | N | 0.341 | neutral | None | None | None | None | N |
T/L | 0.0931 | likely_benign | 0.092 | benign | -0.172 | Destabilizing | 0.055 | N | 0.487 | neutral | None | None | None | None | N |
T/M | 0.0928 | likely_benign | 0.0913 | benign | 0.004 | Stabilizing | 0.667 | D | 0.515 | neutral | None | None | None | None | N |
T/N | 0.1033 | likely_benign | 0.1046 | benign | -0.326 | Destabilizing | 0.096 | N | 0.429 | neutral | N | 0.484521304 | None | None | N |
T/P | 0.1143 | likely_benign | 0.1124 | benign | -0.278 | Destabilizing | 0.301 | N | 0.513 | neutral | N | 0.489472042 | None | None | N |
T/Q | 0.1705 | likely_benign | 0.1857 | benign | -0.511 | Destabilizing | 0.497 | N | 0.524 | neutral | None | None | None | None | N |
T/R | 0.1393 | likely_benign | 0.1421 | benign | -0.239 | Destabilizing | 0.124 | N | 0.512 | neutral | None | None | None | None | N |
T/S | 0.0908 | likely_benign | 0.0989 | benign | -0.624 | Destabilizing | 0.001 | N | 0.235 | neutral | N | 0.440304439 | None | None | N |
T/V | 0.1214 | likely_benign | 0.1285 | benign | -0.278 | Destabilizing | None | N | 0.225 | neutral | None | None | None | None | N |
T/W | 0.4685 | ambiguous | 0.5445 | ambiguous | -0.798 | Destabilizing | 0.958 | D | 0.563 | neutral | None | None | None | None | N |
T/Y | 0.2421 | likely_benign | 0.2782 | benign | -0.544 | Destabilizing | 0.004 | N | 0.475 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.