Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15082 | 45469;45470;45471 | chr2:178621580;178621579;178621578 | chr2:179486307;179486306;179486305 |
N2AB | 13441 | 40546;40547;40548 | chr2:178621580;178621579;178621578 | chr2:179486307;179486306;179486305 |
N2A | 12514 | 37765;37766;37767 | chr2:178621580;178621579;178621578 | chr2:179486307;179486306;179486305 |
N2B | 6017 | 18274;18275;18276 | chr2:178621580;178621579;178621578 | chr2:179486307;179486306;179486305 |
Novex-1 | 6142 | 18649;18650;18651 | chr2:178621580;178621579;178621578 | chr2:179486307;179486306;179486305 |
Novex-2 | 6209 | 18850;18851;18852 | chr2:178621580;178621579;178621578 | chr2:179486307;179486306;179486305 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs1400844297 | None | 1.0 | D | 0.696 | 0.475 | 0.681741161928 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2918 | likely_benign | 0.2464 | benign | -0.499 | Destabilizing | 0.974 | D | 0.499 | neutral | D | 0.67915706 | None | None | N |
G/C | 0.5656 | likely_pathogenic | 0.5094 | ambiguous | -0.902 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
G/D | 0.2061 | likely_benign | 0.253 | benign | -0.898 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
G/E | 0.2684 | likely_benign | 0.2963 | benign | -1.051 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | D | 0.680471531 | None | None | N |
G/F | 0.8396 | likely_pathogenic | 0.7961 | pathogenic | -1.127 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
G/H | 0.6265 | likely_pathogenic | 0.6141 | pathogenic | -0.804 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
G/I | 0.6734 | likely_pathogenic | 0.5674 | pathogenic | -0.527 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
G/K | 0.5755 | likely_pathogenic | 0.5946 | pathogenic | -1.098 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
G/L | 0.7255 | likely_pathogenic | 0.6734 | pathogenic | -0.527 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
G/M | 0.7618 | likely_pathogenic | 0.6988 | pathogenic | -0.439 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
G/N | 0.2971 | likely_benign | 0.2973 | benign | -0.684 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
G/P | 0.9186 | likely_pathogenic | 0.8751 | pathogenic | -0.482 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
G/Q | 0.4919 | ambiguous | 0.4819 | ambiguous | -0.996 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
G/R | 0.5325 | ambiguous | 0.5186 | ambiguous | -0.589 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.691035666 | None | None | N |
G/S | 0.1793 | likely_benign | 0.1571 | benign | -0.836 | Destabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | N |
G/T | 0.4378 | ambiguous | 0.366 | ambiguous | -0.925 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
G/V | 0.5201 | ambiguous | 0.4183 | ambiguous | -0.482 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | D | 0.742345716 | None | None | N |
G/W | 0.6816 | likely_pathogenic | 0.6453 | pathogenic | -1.297 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
G/Y | 0.6611 | likely_pathogenic | 0.6189 | pathogenic | -0.963 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.