Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15093 | 45502;45503;45504 | chr2:178621547;178621546;178621545 | chr2:179486274;179486273;179486272 |
N2AB | 13452 | 40579;40580;40581 | chr2:178621547;178621546;178621545 | chr2:179486274;179486273;179486272 |
N2A | 12525 | 37798;37799;37800 | chr2:178621547;178621546;178621545 | chr2:179486274;179486273;179486272 |
N2B | 6028 | 18307;18308;18309 | chr2:178621547;178621546;178621545 | chr2:179486274;179486273;179486272 |
Novex-1 | 6153 | 18682;18683;18684 | chr2:178621547;178621546;178621545 | chr2:179486274;179486273;179486272 |
Novex-2 | 6220 | 18883;18884;18885 | chr2:178621547;178621546;178621545 | chr2:179486274;179486273;179486272 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/P | rs1275555058 | None | 0.065 | D | 0.471 | 0.278 | 0.342865806769 | gnomAD-4.0.0 | 1.59382E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78427E-05 | None | 0 | 0 | 0 | 0 | 0 |
H/Y | None | None | 0.065 | N | 0.353 | 0.111 | 0.240491677333 | gnomAD-4.0.0 | 6.84689E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99931E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1931 | likely_benign | 0.1791 | benign | -0.316 | Destabilizing | 0.004 | N | 0.247 | neutral | None | None | None | None | N |
H/C | 0.1437 | likely_benign | 0.1539 | benign | 0.486 | Stabilizing | 0.497 | N | 0.429 | neutral | None | None | None | None | N |
H/D | 0.1776 | likely_benign | 0.1773 | benign | -0.172 | Destabilizing | 0.007 | N | 0.381 | neutral | N | 0.470006298 | None | None | N |
H/E | 0.2158 | likely_benign | 0.1993 | benign | -0.117 | Destabilizing | 0.002 | N | 0.249 | neutral | None | None | None | None | N |
H/F | 0.2518 | likely_benign | 0.2359 | benign | 0.433 | Stabilizing | 0.22 | N | 0.46 | neutral | None | None | None | None | N |
H/G | 0.2016 | likely_benign | 0.1996 | benign | -0.646 | Destabilizing | 0.004 | N | 0.3 | neutral | None | None | None | None | N |
H/I | 0.2534 | likely_benign | 0.2303 | benign | 0.565 | Stabilizing | 0.085 | N | 0.537 | neutral | None | None | None | None | N |
H/K | 0.1352 | likely_benign | 0.1366 | benign | -0.256 | Destabilizing | None | N | 0.115 | neutral | None | None | None | None | N |
H/L | 0.0902 | likely_benign | 0.08 | benign | 0.565 | Stabilizing | 0.014 | N | 0.377 | neutral | N | 0.487572841 | None | None | N |
H/M | 0.3735 | ambiguous | 0.3396 | benign | 0.505 | Stabilizing | 0.245 | N | 0.439 | neutral | None | None | None | None | N |
H/N | 0.0821 | likely_benign | 0.0821 | benign | -0.107 | Destabilizing | None | N | 0.115 | neutral | N | 0.479456114 | None | None | N |
H/P | 0.3037 | likely_benign | 0.3145 | benign | 0.295 | Stabilizing | 0.065 | N | 0.471 | neutral | D | 0.556594979 | None | None | N |
H/Q | 0.1045 | likely_benign | 0.0957 | benign | 0.058 | Stabilizing | None | N | 0.098 | neutral | N | 0.422500274 | None | None | N |
H/R | 0.0667 | likely_benign | 0.0671 | benign | -0.799 | Destabilizing | None | N | 0.103 | neutral | N | 0.378063553 | None | None | N |
H/S | 0.1433 | likely_benign | 0.1409 | benign | -0.097 | Destabilizing | 0.004 | N | 0.261 | neutral | None | None | None | None | N |
H/T | 0.1904 | likely_benign | 0.1775 | benign | 0.053 | Stabilizing | 0.018 | N | 0.353 | neutral | None | None | None | None | N |
H/V | 0.1884 | likely_benign | 0.1756 | benign | 0.295 | Stabilizing | 0.018 | N | 0.427 | neutral | None | None | None | None | N |
H/W | 0.3665 | ambiguous | 0.3549 | ambiguous | 0.52 | Stabilizing | 0.788 | D | 0.414 | neutral | None | None | None | None | N |
H/Y | 0.1052 | likely_benign | 0.1027 | benign | 0.791 | Stabilizing | 0.065 | N | 0.353 | neutral | N | 0.500534459 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.