Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15100 | 45523;45524;45525 | chr2:178621526;178621525;178621524 | chr2:179486253;179486252;179486251 |
N2AB | 13459 | 40600;40601;40602 | chr2:178621526;178621525;178621524 | chr2:179486253;179486252;179486251 |
N2A | 12532 | 37819;37820;37821 | chr2:178621526;178621525;178621524 | chr2:179486253;179486252;179486251 |
N2B | 6035 | 18328;18329;18330 | chr2:178621526;178621525;178621524 | chr2:179486253;179486252;179486251 |
Novex-1 | 6160 | 18703;18704;18705 | chr2:178621526;178621525;178621524 | chr2:179486253;179486252;179486251 |
Novex-2 | 6227 | 18904;18905;18906 | chr2:178621526;178621525;178621524 | chr2:179486253;179486252;179486251 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.998 | D | 0.854 | 0.814 | 0.939711833812 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9948 | likely_pathogenic | 0.9927 | pathogenic | -2.627 | Highly Destabilizing | 0.87 | D | 0.817 | deleterious | None | None | None | None | N |
Y/C | 0.9073 | likely_pathogenic | 0.9029 | pathogenic | -2.161 | Highly Destabilizing | 0.998 | D | 0.854 | deleterious | D | 0.796094217 | None | None | N |
Y/D | 0.9971 | likely_pathogenic | 0.9939 | pathogenic | -3.172 | Highly Destabilizing | 0.991 | D | 0.886 | deleterious | D | 0.796094217 | None | None | N |
Y/E | 0.9983 | likely_pathogenic | 0.9974 | pathogenic | -2.933 | Highly Destabilizing | 0.979 | D | 0.868 | deleterious | None | None | None | None | N |
Y/F | 0.1447 | likely_benign | 0.179 | benign | -0.958 | Destabilizing | 0.016 | N | 0.442 | neutral | D | 0.675949081 | None | None | N |
Y/G | 0.9907 | likely_pathogenic | 0.9852 | pathogenic | -3.089 | Highly Destabilizing | 0.979 | D | 0.883 | deleterious | None | None | None | None | N |
Y/H | 0.9528 | likely_pathogenic | 0.9366 | pathogenic | -2.144 | Highly Destabilizing | 0.991 | D | 0.743 | deleterious | D | 0.796666597 | None | None | N |
Y/I | 0.8806 | likely_pathogenic | 0.9013 | pathogenic | -1.099 | Destabilizing | 0.921 | D | 0.819 | deleterious | None | None | None | None | N |
Y/K | 0.9974 | likely_pathogenic | 0.9963 | pathogenic | -2.21 | Highly Destabilizing | 0.979 | D | 0.869 | deleterious | None | None | None | None | N |
Y/L | 0.8591 | likely_pathogenic | 0.8561 | pathogenic | -1.099 | Destabilizing | 0.769 | D | 0.744 | deleterious | None | None | None | None | N |
Y/M | 0.9705 | likely_pathogenic | 0.9717 | pathogenic | -1.203 | Destabilizing | 0.994 | D | 0.807 | deleterious | None | None | None | None | N |
Y/N | 0.9836 | likely_pathogenic | 0.9719 | pathogenic | -3.125 | Highly Destabilizing | 0.991 | D | 0.862 | deleterious | D | 0.796094217 | None | None | N |
Y/P | 0.9984 | likely_pathogenic | 0.9976 | pathogenic | -1.624 | Destabilizing | 0.993 | D | 0.887 | deleterious | None | None | None | None | N |
Y/Q | 0.9972 | likely_pathogenic | 0.9959 | pathogenic | -2.725 | Highly Destabilizing | 0.993 | D | 0.802 | deleterious | None | None | None | None | N |
Y/R | 0.9891 | likely_pathogenic | 0.9856 | pathogenic | -2.275 | Highly Destabilizing | 0.979 | D | 0.853 | deleterious | None | None | None | None | N |
Y/S | 0.9869 | likely_pathogenic | 0.9788 | pathogenic | -3.505 | Highly Destabilizing | 0.973 | D | 0.866 | deleterious | D | 0.796094217 | None | None | N |
Y/T | 0.9925 | likely_pathogenic | 0.9897 | pathogenic | -3.119 | Highly Destabilizing | 0.979 | D | 0.868 | deleterious | None | None | None | None | N |
Y/V | 0.8705 | likely_pathogenic | 0.8851 | pathogenic | -1.624 | Destabilizing | 0.769 | D | 0.777 | deleterious | None | None | None | None | N |
Y/W | 0.7481 | likely_pathogenic | 0.7552 | pathogenic | -0.323 | Destabilizing | 0.994 | D | 0.73 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.