Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15105 | 45538;45539;45540 | chr2:178621511;178621510;178621509 | chr2:179486238;179486237;179486236 |
N2AB | 13464 | 40615;40616;40617 | chr2:178621511;178621510;178621509 | chr2:179486238;179486237;179486236 |
N2A | 12537 | 37834;37835;37836 | chr2:178621511;178621510;178621509 | chr2:179486238;179486237;179486236 |
N2B | 6040 | 18343;18344;18345 | chr2:178621511;178621510;178621509 | chr2:179486238;179486237;179486236 |
Novex-1 | 6165 | 18718;18719;18720 | chr2:178621511;178621510;178621509 | chr2:179486238;179486237;179486236 |
Novex-2 | 6232 | 18919;18920;18921 | chr2:178621511;178621510;178621509 | chr2:179486238;179486237;179486236 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 0.999 | N | 0.799 | 0.363 | 0.655515966292 | gnomAD-4.0.0 | 1.59408E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86307E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1304 | likely_benign | 0.1037 | benign | -0.324 | Destabilizing | 0.992 | D | 0.569 | neutral | N | 0.50425116 | None | None | N |
P/C | 0.7346 | likely_pathogenic | 0.6528 | pathogenic | -0.824 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
P/D | 0.5265 | ambiguous | 0.4256 | ambiguous | -0.118 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
P/E | 0.368 | ambiguous | 0.2946 | benign | -0.226 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
P/F | 0.5985 | likely_pathogenic | 0.479 | ambiguous | -0.641 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
P/G | 0.3774 | ambiguous | 0.3277 | benign | -0.39 | Destabilizing | 0.997 | D | 0.721 | prob.delet. | None | None | None | None | N |
P/H | 0.2775 | likely_benign | 0.202 | benign | 0.021 | Stabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
P/I | 0.4518 | ambiguous | 0.3499 | ambiguous | -0.291 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
P/K | 0.3838 | ambiguous | 0.3039 | benign | -0.331 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
P/L | 0.1832 | likely_benign | 0.1387 | benign | -0.291 | Destabilizing | 0.999 | D | 0.761 | deleterious | N | 0.505401267 | None | None | N |
P/M | 0.4699 | ambiguous | 0.3863 | ambiguous | -0.551 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
P/N | 0.4372 | ambiguous | 0.3553 | ambiguous | -0.17 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
P/Q | 0.2245 | likely_benign | 0.1731 | benign | -0.348 | Destabilizing | 0.999 | D | 0.757 | deleterious | N | 0.505256611 | None | None | N |
P/R | 0.2439 | likely_benign | 0.1815 | benign | 0.074 | Stabilizing | 0.999 | D | 0.799 | deleterious | N | 0.490438205 | None | None | N |
P/S | 0.1649 | likely_benign | 0.1257 | benign | -0.518 | Destabilizing | 0.957 | D | 0.415 | neutral | N | 0.487296851 | None | None | N |
P/T | 0.1685 | likely_benign | 0.1253 | benign | -0.53 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | N | 0.48590916 | None | None | N |
P/V | 0.3335 | likely_benign | 0.2656 | benign | -0.274 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
P/W | 0.7458 | likely_pathogenic | 0.6486 | pathogenic | -0.699 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
P/Y | 0.5456 | ambiguous | 0.4291 | ambiguous | -0.427 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.