Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15113 | 45562;45563;45564 | chr2:178621487;178621486;178621485 | chr2:179486214;179486213;179486212 |
N2AB | 13472 | 40639;40640;40641 | chr2:178621487;178621486;178621485 | chr2:179486214;179486213;179486212 |
N2A | 12545 | 37858;37859;37860 | chr2:178621487;178621486;178621485 | chr2:179486214;179486213;179486212 |
N2B | 6048 | 18367;18368;18369 | chr2:178621487;178621486;178621485 | chr2:179486214;179486213;179486212 |
Novex-1 | 6173 | 18742;18743;18744 | chr2:178621487;178621486;178621485 | chr2:179486214;179486213;179486212 |
Novex-2 | 6240 | 18943;18944;18945 | chr2:178621487;178621486;178621485 | chr2:179486214;179486213;179486212 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs794729437 | -2.22 | 0.165 | N | 0.475 | 0.297 | 0.452072420954 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
V/A | rs794729437 | -2.22 | 0.165 | N | 0.475 | 0.297 | 0.452072420954 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/A | rs794729437 | -2.22 | 0.165 | N | 0.475 | 0.297 | 0.452072420954 | gnomAD-4.0.0 | 3.85094E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19193E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7103 | likely_pathogenic | 0.6461 | pathogenic | -2.115 | Highly Destabilizing | 0.165 | N | 0.475 | neutral | N | 0.507405094 | None | None | N |
V/C | 0.9271 | likely_pathogenic | 0.9502 | pathogenic | -1.755 | Destabilizing | 0.981 | D | 0.626 | neutral | None | None | None | None | N |
V/D | 0.9943 | likely_pathogenic | 0.9864 | pathogenic | -2.937 | Highly Destabilizing | 0.912 | D | 0.692 | prob.neutral | D | 0.591736491 | None | None | N |
V/E | 0.9827 | likely_pathogenic | 0.9639 | pathogenic | -2.696 | Highly Destabilizing | 0.818 | D | 0.659 | neutral | None | None | None | None | N |
V/F | 0.6166 | likely_pathogenic | 0.6732 | pathogenic | -1.231 | Destabilizing | 0.001 | N | 0.391 | neutral | N | 0.504986905 | None | None | N |
V/G | 0.8015 | likely_pathogenic | 0.6877 | pathogenic | -2.681 | Highly Destabilizing | 0.492 | N | 0.663 | neutral | D | 0.536517401 | None | None | N |
V/H | 0.995 | likely_pathogenic | 0.9932 | pathogenic | -2.553 | Highly Destabilizing | 0.981 | D | 0.675 | prob.neutral | None | None | None | None | N |
V/I | 0.1008 | likely_benign | 0.1186 | benign | -0.521 | Destabilizing | 0.041 | N | 0.363 | neutral | N | 0.498555064 | None | None | N |
V/K | 0.9889 | likely_pathogenic | 0.9786 | pathogenic | -1.857 | Destabilizing | 0.563 | D | 0.642 | neutral | None | None | None | None | N |
V/L | 0.2882 | likely_benign | 0.3837 | ambiguous | -0.521 | Destabilizing | None | N | 0.249 | neutral | N | 0.363228153 | None | None | N |
V/M | 0.4395 | ambiguous | 0.4903 | ambiguous | -0.639 | Destabilizing | 0.69 | D | 0.651 | neutral | None | None | None | None | N |
V/N | 0.9812 | likely_pathogenic | 0.9663 | pathogenic | -2.251 | Highly Destabilizing | 0.932 | D | 0.698 | prob.neutral | None | None | None | None | N |
V/P | 0.9907 | likely_pathogenic | 0.9891 | pathogenic | -1.026 | Destabilizing | 0.932 | D | 0.65 | neutral | None | None | None | None | N |
V/Q | 0.9825 | likely_pathogenic | 0.9687 | pathogenic | -2.046 | Highly Destabilizing | 0.932 | D | 0.653 | neutral | None | None | None | None | N |
V/R | 0.9823 | likely_pathogenic | 0.9662 | pathogenic | -1.739 | Destabilizing | 0.818 | D | 0.694 | prob.neutral | None | None | None | None | N |
V/S | 0.9452 | likely_pathogenic | 0.9097 | pathogenic | -2.846 | Highly Destabilizing | 0.563 | D | 0.621 | neutral | None | None | None | None | N |
V/T | 0.8606 | likely_pathogenic | 0.8075 | pathogenic | -2.457 | Highly Destabilizing | 0.388 | N | 0.603 | neutral | None | None | None | None | N |
V/W | 0.9902 | likely_pathogenic | 0.9906 | pathogenic | -1.837 | Destabilizing | 0.981 | D | 0.671 | neutral | None | None | None | None | N |
V/Y | 0.9662 | likely_pathogenic | 0.9642 | pathogenic | -1.437 | Destabilizing | 0.241 | N | 0.608 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.