Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15116 | 45571;45572;45573 | chr2:178621478;178621477;178621476 | chr2:179486205;179486204;179486203 |
N2AB | 13475 | 40648;40649;40650 | chr2:178621478;178621477;178621476 | chr2:179486205;179486204;179486203 |
N2A | 12548 | 37867;37868;37869 | chr2:178621478;178621477;178621476 | chr2:179486205;179486204;179486203 |
N2B | 6051 | 18376;18377;18378 | chr2:178621478;178621477;178621476 | chr2:179486205;179486204;179486203 |
Novex-1 | 6176 | 18751;18752;18753 | chr2:178621478;178621477;178621476 | chr2:179486205;179486204;179486203 |
Novex-2 | 6243 | 18952;18953;18954 | chr2:178621478;178621477;178621476 | chr2:179486205;179486204;179486203 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs1413491989 | 0.054 | 0.213 | N | 0.208 | 0.207 | 0.258283824007 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
H/R | rs1413491989 | 0.054 | 0.213 | N | 0.208 | 0.207 | 0.258283824007 | gnomAD-4.0.0 | 3.42425E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00019E-07 | 4.64145E-05 | 0 |
H/Y | None | None | 0.523 | N | 0.257 | 0.111 | 0.288727942641 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2899 | likely_benign | 0.3248 | benign | 0.121 | Stabilizing | 0.228 | N | 0.235 | neutral | None | None | None | None | I |
H/C | 0.2193 | likely_benign | 0.287 | benign | 0.648 | Stabilizing | 0.983 | D | 0.205 | neutral | None | None | None | None | I |
H/D | 0.2274 | likely_benign | 0.2746 | benign | -0.186 | Destabilizing | 0.101 | N | 0.251 | neutral | N | 0.485758781 | None | None | I |
H/E | 0.27 | likely_benign | 0.3119 | benign | -0.147 | Destabilizing | 0.129 | N | 0.239 | neutral | None | None | None | None | I |
H/F | 0.3275 | likely_benign | 0.3631 | ambiguous | 0.936 | Stabilizing | 0.716 | D | 0.294 | neutral | None | None | None | None | I |
H/G | 0.3293 | likely_benign | 0.3604 | ambiguous | -0.181 | Destabilizing | 0.129 | N | 0.253 | neutral | None | None | None | None | I |
H/I | 0.2739 | likely_benign | 0.3433 | ambiguous | 0.904 | Stabilizing | 0.264 | N | 0.319 | neutral | None | None | None | None | I |
H/K | 0.1958 | likely_benign | 0.2079 | benign | 0.029 | Stabilizing | 0.001 | N | 0.142 | neutral | None | None | None | None | I |
H/L | 0.1144 | likely_benign | 0.1281 | benign | 0.904 | Stabilizing | 0.001 | N | 0.187 | neutral | D | 0.56666123 | None | None | I |
H/M | 0.4154 | ambiguous | 0.4729 | ambiguous | 0.658 | Stabilizing | 0.716 | D | 0.21 | neutral | None | None | None | None | I |
H/N | 0.0748 | likely_benign | 0.0867 | benign | -0.002 | Destabilizing | None | N | 0.092 | neutral | N | 0.490802684 | None | None | I |
H/P | 0.4759 | ambiguous | 0.4407 | ambiguous | 0.668 | Stabilizing | 0.794 | D | 0.305 | neutral | D | 0.56666123 | None | None | I |
H/Q | 0.1467 | likely_benign | 0.1585 | benign | 0.14 | Stabilizing | 0.351 | N | 0.251 | neutral | N | 0.488363935 | None | None | I |
H/R | 0.0941 | likely_benign | 0.0979 | benign | -0.617 | Destabilizing | 0.213 | N | 0.208 | neutral | N | 0.440553411 | None | None | I |
H/S | 0.1943 | likely_benign | 0.2248 | benign | 0.137 | Stabilizing | 0.129 | N | 0.26 | neutral | None | None | None | None | I |
H/T | 0.2094 | likely_benign | 0.2549 | benign | 0.276 | Stabilizing | 0.228 | N | 0.239 | neutral | None | None | None | None | I |
H/V | 0.2304 | likely_benign | 0.2812 | benign | 0.668 | Stabilizing | 0.264 | N | 0.271 | neutral | None | None | None | None | I |
H/W | 0.4293 | ambiguous | 0.4848 | ambiguous | 0.973 | Stabilizing | 0.983 | D | 0.222 | neutral | None | None | None | None | I |
H/Y | 0.1105 | likely_benign | 0.1253 | benign | 1.187 | Stabilizing | 0.523 | D | 0.257 | neutral | N | 0.493840564 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.