Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15121 | 45586;45587;45588 | chr2:178621357;178621356;178621355 | chr2:179486084;179486083;179486082 |
N2AB | 13480 | 40663;40664;40665 | chr2:178621357;178621356;178621355 | chr2:179486084;179486083;179486082 |
N2A | 12553 | 37882;37883;37884 | chr2:178621357;178621356;178621355 | chr2:179486084;179486083;179486082 |
N2B | 6056 | 18391;18392;18393 | chr2:178621357;178621356;178621355 | chr2:179486084;179486083;179486082 |
Novex-1 | 6181 | 18766;18767;18768 | chr2:178621357;178621356;178621355 | chr2:179486084;179486083;179486082 |
Novex-2 | 6248 | 18967;18968;18969 | chr2:178621357;178621356;178621355 | chr2:179486084;179486083;179486082 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1264862895 | 0.317 | 0.998 | N | 0.51 | 0.37 | 0.367992661779 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 2.94E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1264862895 | 0.317 | 0.998 | N | 0.51 | 0.37 | 0.367992661779 | gnomAD-4.0.0 | 4.79411E-06 | None | None | None | None | N | None | 0 | 6.93033E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3821 | ambiguous | 0.4181 | ambiguous | -0.338 | Destabilizing | 0.998 | D | 0.553 | neutral | D | 0.534439674 | None | None | N |
E/C | 0.9785 | likely_pathogenic | 0.9817 | pathogenic | -0.343 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/D | 0.3922 | ambiguous | 0.3649 | ambiguous | -0.552 | Destabilizing | 0.998 | D | 0.429 | neutral | N | 0.513621709 | None | None | N |
E/F | 0.9553 | likely_pathogenic | 0.9683 | pathogenic | 0.295 | Stabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
E/G | 0.5095 | ambiguous | 0.5627 | ambiguous | -0.625 | Destabilizing | 0.999 | D | 0.556 | neutral | D | 0.62062925 | None | None | N |
E/H | 0.8415 | likely_pathogenic | 0.8662 | pathogenic | 0.613 | Stabilizing | 0.702 | D | 0.295 | neutral | None | None | None | None | N |
E/I | 0.7384 | likely_pathogenic | 0.7887 | pathogenic | 0.419 | Stabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
E/K | 0.4376 | ambiguous | 0.5088 | ambiguous | 0.246 | Stabilizing | 0.998 | D | 0.51 | neutral | N | 0.506516677 | None | None | N |
E/L | 0.8306 | likely_pathogenic | 0.8611 | pathogenic | 0.419 | Stabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
E/M | 0.8187 | likely_pathogenic | 0.8517 | pathogenic | 0.34 | Stabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
E/N | 0.6372 | likely_pathogenic | 0.6464 | pathogenic | -0.509 | Destabilizing | 0.999 | D | 0.614 | neutral | None | None | None | None | N |
E/P | 0.961 | likely_pathogenic | 0.9475 | pathogenic | 0.188 | Stabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | N |
E/Q | 0.307 | likely_benign | 0.3552 | ambiguous | -0.371 | Destabilizing | 0.999 | D | 0.594 | neutral | N | 0.509651256 | None | None | N |
E/R | 0.6226 | likely_pathogenic | 0.6961 | pathogenic | 0.648 | Stabilizing | 1.0 | D | 0.618 | neutral | None | None | None | None | N |
E/S | 0.4694 | ambiguous | 0.5114 | ambiguous | -0.652 | Destabilizing | 0.998 | D | 0.553 | neutral | None | None | None | None | N |
E/T | 0.49 | ambiguous | 0.5355 | ambiguous | -0.39 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
E/V | 0.4768 | ambiguous | 0.5517 | ambiguous | 0.188 | Stabilizing | 1.0 | D | 0.629 | neutral | N | 0.503429264 | None | None | N |
E/W | 0.9911 | likely_pathogenic | 0.9932 | pathogenic | 0.575 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/Y | 0.9251 | likely_pathogenic | 0.9393 | pathogenic | 0.584 | Stabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.