Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15137 | 45634;45635;45636 | chr2:178621309;178621308;178621307 | chr2:179486036;179486035;179486034 |
N2AB | 13496 | 40711;40712;40713 | chr2:178621309;178621308;178621307 | chr2:179486036;179486035;179486034 |
N2A | 12569 | 37930;37931;37932 | chr2:178621309;178621308;178621307 | chr2:179486036;179486035;179486034 |
N2B | 6072 | 18439;18440;18441 | chr2:178621309;178621308;178621307 | chr2:179486036;179486035;179486034 |
Novex-1 | 6197 | 18814;18815;18816 | chr2:178621309;178621308;178621307 | chr2:179486036;179486035;179486034 |
Novex-2 | 6264 | 19015;19016;19017 | chr2:178621309;178621308;178621307 | chr2:179486036;179486035;179486034 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | rs1305459337 | -2.052 | 1.0 | D | 0.84 | 0.486 | 0.651316673006 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
A/D | rs1305459337 | -2.052 | 1.0 | D | 0.84 | 0.486 | 0.651316673006 | gnomAD-4.0.0 | 1.59519E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43526E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8404 | likely_pathogenic | 0.8791 | pathogenic | -1.0 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
A/D | 0.993 | likely_pathogenic | 0.9931 | pathogenic | -2.168 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | D | 0.701160056 | None | None | N |
A/E | 0.985 | likely_pathogenic | 0.9866 | pathogenic | -1.976 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
A/F | 0.9629 | likely_pathogenic | 0.9761 | pathogenic | -0.811 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
A/G | 0.3082 | likely_benign | 0.311 | benign | -1.67 | Destabilizing | 1.0 | D | 0.584 | neutral | D | 0.612325246 | None | None | N |
A/H | 0.9943 | likely_pathogenic | 0.9955 | pathogenic | -1.957 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
A/I | 0.7536 | likely_pathogenic | 0.8376 | pathogenic | 0.059 | Stabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
A/K | 0.9947 | likely_pathogenic | 0.995 | pathogenic | -1.478 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
A/L | 0.7449 | likely_pathogenic | 0.8197 | pathogenic | 0.059 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
A/M | 0.8257 | likely_pathogenic | 0.8858 | pathogenic | -0.002 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
A/N | 0.9813 | likely_pathogenic | 0.9854 | pathogenic | -1.664 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
A/P | 0.9814 | likely_pathogenic | 0.9831 | pathogenic | -0.317 | Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.664526904 | None | None | N |
A/Q | 0.979 | likely_pathogenic | 0.9822 | pathogenic | -1.505 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
A/R | 0.9873 | likely_pathogenic | 0.9871 | pathogenic | -1.471 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
A/S | 0.441 | ambiguous | 0.4755 | ambiguous | -2.101 | Highly Destabilizing | 1.0 | D | 0.599 | neutral | D | 0.624645815 | None | None | N |
A/T | 0.4802 | ambiguous | 0.5589 | ambiguous | -1.776 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | D | 0.566405255 | None | None | N |
A/V | 0.3939 | ambiguous | 0.4852 | ambiguous | -0.317 | Destabilizing | 1.0 | D | 0.615 | neutral | N | 0.440347153 | None | None | N |
A/W | 0.9975 | likely_pathogenic | 0.9981 | pathogenic | -1.513 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
A/Y | 0.9875 | likely_pathogenic | 0.9915 | pathogenic | -0.947 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.