Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15140 | 45643;45644;45645 | chr2:178621300;178621299;178621298 | chr2:179486027;179486026;179486025 |
N2AB | 13499 | 40720;40721;40722 | chr2:178621300;178621299;178621298 | chr2:179486027;179486026;179486025 |
N2A | 12572 | 37939;37940;37941 | chr2:178621300;178621299;178621298 | chr2:179486027;179486026;179486025 |
N2B | 6075 | 18448;18449;18450 | chr2:178621300;178621299;178621298 | chr2:179486027;179486026;179486025 |
Novex-1 | 6200 | 18823;18824;18825 | chr2:178621300;178621299;178621298 | chr2:179486027;179486026;179486025 |
Novex-2 | 6267 | 19024;19025;19026 | chr2:178621300;178621299;178621298 | chr2:179486027;179486026;179486025 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.267 | 0.078 | 0.624871295421 | gnomAD-4.0.0 | 1.59516E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86356E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1649 | likely_benign | 0.1667 | benign | -1.712 | Destabilizing | None | N | 0.277 | neutral | N | 0.494860358 | None | None | N |
V/C | 0.7317 | likely_pathogenic | 0.6845 | pathogenic | -1.123 | Destabilizing | 0.356 | N | 0.547 | neutral | None | None | None | None | N |
V/D | 0.4114 | ambiguous | 0.413 | ambiguous | -1.645 | Destabilizing | 0.055 | N | 0.561 | neutral | N | 0.498571394 | None | None | N |
V/E | 0.2731 | likely_benign | 0.2794 | benign | -1.622 | Destabilizing | 0.072 | N | 0.509 | neutral | None | None | None | None | N |
V/F | 0.1674 | likely_benign | 0.1734 | benign | -1.275 | Destabilizing | 0.171 | N | 0.581 | neutral | N | 0.510373586 | None | None | N |
V/G | 0.2621 | likely_benign | 0.2597 | benign | -2.067 | Highly Destabilizing | 0.012 | N | 0.485 | neutral | N | 0.502141643 | None | None | N |
V/H | 0.4899 | ambiguous | 0.4621 | ambiguous | -1.605 | Destabilizing | 0.676 | D | 0.592 | neutral | None | None | None | None | N |
V/I | 0.0739 | likely_benign | 0.0775 | benign | -0.819 | Destabilizing | None | N | 0.267 | neutral | N | 0.510529285 | None | None | N |
V/K | 0.3921 | ambiguous | 0.3955 | ambiguous | -1.482 | Destabilizing | 0.038 | N | 0.518 | neutral | None | None | None | None | N |
V/L | 0.1612 | likely_benign | 0.1768 | benign | -0.819 | Destabilizing | 0.012 | N | 0.417 | neutral | N | 0.506989142 | None | None | N |
V/M | 0.1346 | likely_benign | 0.1682 | benign | -0.581 | Destabilizing | 0.214 | N | 0.566 | neutral | None | None | None | None | N |
V/N | 0.2491 | likely_benign | 0.275 | benign | -1.287 | Destabilizing | 0.038 | N | 0.597 | neutral | None | None | None | None | N |
V/P | 0.8268 | likely_pathogenic | 0.8088 | pathogenic | -1.083 | Destabilizing | 0.356 | N | 0.595 | neutral | None | None | None | None | N |
V/Q | 0.2753 | likely_benign | 0.2902 | benign | -1.436 | Destabilizing | 0.214 | N | 0.595 | neutral | None | None | None | None | N |
V/R | 0.3397 | likely_benign | 0.3204 | benign | -0.941 | Destabilizing | 0.214 | N | 0.605 | neutral | None | None | None | None | N |
V/S | 0.1527 | likely_benign | 0.1585 | benign | -1.831 | Destabilizing | None | N | 0.471 | neutral | None | None | None | None | N |
V/T | 0.135 | likely_benign | 0.1434 | benign | -1.697 | Destabilizing | None | N | 0.284 | neutral | None | None | None | None | N |
V/W | 0.8372 | likely_pathogenic | 0.8214 | pathogenic | -1.505 | Destabilizing | 0.864 | D | 0.623 | neutral | None | None | None | None | N |
V/Y | 0.547 | ambiguous | 0.5338 | ambiguous | -1.228 | Destabilizing | 0.356 | N | 0.569 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.