Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15154 | 45685;45686;45687 | chr2:178621258;178621257;178621256 | chr2:179485985;179485984;179485983 |
N2AB | 13513 | 40762;40763;40764 | chr2:178621258;178621257;178621256 | chr2:179485985;179485984;179485983 |
N2A | 12586 | 37981;37982;37983 | chr2:178621258;178621257;178621256 | chr2:179485985;179485984;179485983 |
N2B | 6089 | 18490;18491;18492 | chr2:178621258;178621257;178621256 | chr2:179485985;179485984;179485983 |
Novex-1 | 6214 | 18865;18866;18867 | chr2:178621258;178621257;178621256 | chr2:179485985;179485984;179485983 |
Novex-2 | 6281 | 19066;19067;19068 | chr2:178621258;178621257;178621256 | chr2:179485985;179485984;179485983 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.001 | N | 0.148 | 0.125 | 0.12205267543 | gnomAD-4.0.0 | 1.36954E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79982E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8034 | likely_pathogenic | 0.7129 | pathogenic | -1.404 | Destabilizing | 0.495 | N | 0.517 | neutral | None | None | None | None | N |
R/C | 0.4102 | ambiguous | 0.3465 | ambiguous | -1.295 | Destabilizing | 0.995 | D | 0.703 | prob.neutral | None | None | None | None | N |
R/D | 0.9425 | likely_pathogenic | 0.9045 | pathogenic | -0.253 | Destabilizing | 0.704 | D | 0.683 | prob.neutral | None | None | None | None | N |
R/E | 0.7357 | likely_pathogenic | 0.6479 | pathogenic | -0.075 | Destabilizing | 0.329 | N | 0.566 | neutral | None | None | None | None | N |
R/F | 0.7964 | likely_pathogenic | 0.7668 | pathogenic | -1.088 | Destabilizing | 0.807 | D | 0.711 | prob.delet. | None | None | None | None | N |
R/G | 0.761 | likely_pathogenic | 0.6571 | pathogenic | -1.744 | Destabilizing | 0.642 | D | 0.603 | neutral | N | 0.517000873 | None | None | N |
R/H | 0.2062 | likely_benign | 0.1942 | benign | -2.021 | Highly Destabilizing | 0.981 | D | 0.619 | neutral | None | None | None | None | N |
R/I | 0.4225 | ambiguous | 0.3636 | ambiguous | -0.458 | Destabilizing | 0.543 | D | 0.691 | prob.neutral | None | None | None | None | N |
R/K | 0.1178 | likely_benign | 0.1103 | benign | -0.956 | Destabilizing | 0.001 | N | 0.148 | neutral | N | 0.379704166 | None | None | N |
R/L | 0.4245 | ambiguous | 0.3523 | ambiguous | -0.458 | Destabilizing | 0.007 | N | 0.437 | neutral | None | None | None | None | N |
R/M | 0.4709 | ambiguous | 0.4075 | ambiguous | -0.818 | Destabilizing | 0.863 | D | 0.649 | neutral | D | 0.611284029 | None | None | N |
R/N | 0.864 | likely_pathogenic | 0.8242 | pathogenic | -0.72 | Destabilizing | 0.704 | D | 0.606 | neutral | None | None | None | None | N |
R/P | 0.9904 | likely_pathogenic | 0.9836 | pathogenic | -0.756 | Destabilizing | 0.944 | D | 0.691 | prob.neutral | None | None | None | None | N |
R/Q | 0.1935 | likely_benign | 0.1682 | benign | -0.762 | Destabilizing | 0.704 | D | 0.595 | neutral | None | None | None | None | N |
R/S | 0.8743 | likely_pathogenic | 0.812 | pathogenic | -1.637 | Destabilizing | 0.642 | D | 0.597 | neutral | N | 0.446985742 | None | None | N |
R/T | 0.6824 | likely_pathogenic | 0.5707 | pathogenic | -1.238 | Destabilizing | 0.642 | D | 0.606 | neutral | N | 0.446985742 | None | None | N |
R/V | 0.5812 | likely_pathogenic | 0.5112 | ambiguous | -0.756 | Destabilizing | 0.543 | D | 0.625 | neutral | None | None | None | None | N |
R/W | 0.3723 | ambiguous | 0.3233 | benign | -0.664 | Destabilizing | 0.013 | N | 0.481 | neutral | N | 0.490047739 | None | None | N |
R/Y | 0.6279 | likely_pathogenic | 0.5923 | pathogenic | -0.451 | Destabilizing | 0.807 | D | 0.688 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.