Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15159 | 45700;45701;45702 | chr2:178621243;178621242;178621241 | chr2:179485970;179485969;179485968 |
N2AB | 13518 | 40777;40778;40779 | chr2:178621243;178621242;178621241 | chr2:179485970;179485969;179485968 |
N2A | 12591 | 37996;37997;37998 | chr2:178621243;178621242;178621241 | chr2:179485970;179485969;179485968 |
N2B | 6094 | 18505;18506;18507 | chr2:178621243;178621242;178621241 | chr2:179485970;179485969;179485968 |
Novex-1 | 6219 | 18880;18881;18882 | chr2:178621243;178621242;178621241 | chr2:179485970;179485969;179485968 |
Novex-2 | 6286 | 19081;19082;19083 | chr2:178621243;178621242;178621241 | chr2:179485970;179485969;179485968 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | D | 0.735 | 0.543 | 0.795952509824 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
L/P | None | None | 0.999 | D | 0.863 | 0.789 | 0.865169967319 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
L/V | None | None | 0.996 | D | 0.501 | 0.392 | 0.69744551405 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8061 | likely_pathogenic | 0.7679 | pathogenic | -2.276 | Highly Destabilizing | 0.813 | D | 0.403 | neutral | None | None | None | None | N |
L/C | 0.9268 | likely_pathogenic | 0.8927 | pathogenic | -1.539 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
L/D | 0.9959 | likely_pathogenic | 0.9953 | pathogenic | -2.07 | Highly Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
L/E | 0.9498 | likely_pathogenic | 0.9405 | pathogenic | -1.871 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
L/F | 0.4919 | ambiguous | 0.4438 | ambiguous | -1.324 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | D | 0.709116658 | None | None | N |
L/G | 0.9788 | likely_pathogenic | 0.9706 | pathogenic | -2.775 | Highly Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
L/H | 0.9377 | likely_pathogenic | 0.9197 | pathogenic | -1.898 | Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.769261733 | None | None | N |
L/I | 0.084 | likely_benign | 0.0895 | benign | -0.859 | Destabilizing | 0.998 | D | 0.507 | neutral | N | 0.501487821 | None | None | N |
L/K | 0.9322 | likely_pathogenic | 0.9132 | pathogenic | -1.686 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
L/M | 0.2391 | likely_benign | 0.2351 | benign | -0.812 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
L/N | 0.9801 | likely_pathogenic | 0.9774 | pathogenic | -1.935 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/P | 0.9624 | likely_pathogenic | 0.9505 | pathogenic | -1.31 | Destabilizing | 0.999 | D | 0.863 | deleterious | D | 0.732430227 | None | None | N |
L/Q | 0.8724 | likely_pathogenic | 0.8451 | pathogenic | -1.837 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
L/R | 0.8973 | likely_pathogenic | 0.8633 | pathogenic | -1.367 | Destabilizing | 0.999 | D | 0.847 | deleterious | D | 0.732430227 | None | None | N |
L/S | 0.9572 | likely_pathogenic | 0.9499 | pathogenic | -2.665 | Highly Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
L/T | 0.8184 | likely_pathogenic | 0.7892 | pathogenic | -2.311 | Highly Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
L/V | 0.1238 | likely_benign | 0.1176 | benign | -1.31 | Destabilizing | 0.996 | D | 0.501 | neutral | D | 0.542105616 | None | None | N |
L/W | 0.8465 | likely_pathogenic | 0.7843 | pathogenic | -1.528 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
L/Y | 0.9132 | likely_pathogenic | 0.8859 | pathogenic | -1.262 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.