Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15160 | 45703;45704;45705 | chr2:178621240;178621239;178621238 | chr2:179485967;179485966;179485965 |
N2AB | 13519 | 40780;40781;40782 | chr2:178621240;178621239;178621238 | chr2:179485967;179485966;179485965 |
N2A | 12592 | 37999;38000;38001 | chr2:178621240;178621239;178621238 | chr2:179485967;179485966;179485965 |
N2B | 6095 | 18508;18509;18510 | chr2:178621240;178621239;178621238 | chr2:179485967;179485966;179485965 |
Novex-1 | 6220 | 18883;18884;18885 | chr2:178621240;178621239;178621238 | chr2:179485967;179485966;179485965 |
Novex-2 | 6287 | 19084;19085;19086 | chr2:178621240;178621239;178621238 | chr2:179485967;179485966;179485965 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | 0.831 | 0.956 | N | 0.584 | 0.277 | 0.392855499163 | gnomAD-4.0.0 | 1.59424E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88466E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1281 | likely_benign | 0.1237 | benign | 0.003 | Stabilizing | 0.978 | D | 0.565 | neutral | N | 0.509736654 | None | None | N |
E/C | 0.8479 | likely_pathogenic | 0.7648 | pathogenic | -0.222 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
E/D | 0.1171 | likely_benign | 0.1128 | benign | -0.333 | Destabilizing | 0.978 | D | 0.536 | neutral | N | 0.513098491 | None | None | N |
E/F | 0.6771 | likely_pathogenic | 0.6248 | pathogenic | 0.073 | Stabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | N |
E/G | 0.1764 | likely_benign | 0.1663 | benign | -0.13 | Destabilizing | 0.997 | D | 0.526 | neutral | N | 0.512732126 | None | None | N |
E/H | 0.4323 | ambiguous | 0.3578 | ambiguous | 0.677 | Stabilizing | 0.999 | D | 0.574 | neutral | None | None | None | None | N |
E/I | 0.2547 | likely_benign | 0.2469 | benign | 0.3 | Stabilizing | 0.99 | D | 0.598 | neutral | None | None | None | None | N |
E/K | 0.1543 | likely_benign | 0.1368 | benign | 0.497 | Stabilizing | 0.956 | D | 0.584 | neutral | N | 0.49828695 | None | None | N |
E/L | 0.31 | likely_benign | 0.2784 | benign | 0.3 | Stabilizing | 0.967 | D | 0.581 | neutral | None | None | None | None | N |
E/M | 0.4157 | ambiguous | 0.3805 | ambiguous | 0.039 | Stabilizing | 0.999 | D | 0.594 | neutral | None | None | None | None | N |
E/N | 0.2149 | likely_benign | 0.2172 | benign | 0.074 | Stabilizing | 0.998 | D | 0.588 | neutral | None | None | None | None | N |
E/P | 0.4242 | ambiguous | 0.4153 | ambiguous | 0.219 | Stabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | N |
E/Q | 0.1301 | likely_benign | 0.1132 | benign | 0.121 | Stabilizing | 0.798 | D | 0.309 | neutral | N | 0.497950928 | None | None | N |
E/R | 0.2946 | likely_benign | 0.2285 | benign | 0.742 | Stabilizing | 0.995 | D | 0.582 | neutral | None | None | None | None | N |
E/S | 0.1678 | likely_benign | 0.1595 | benign | -0.015 | Destabilizing | 0.983 | D | 0.575 | neutral | None | None | None | None | N |
E/T | 0.1561 | likely_benign | 0.1536 | benign | 0.111 | Stabilizing | 0.983 | D | 0.569 | neutral | None | None | None | None | N |
E/V | 0.1457 | likely_benign | 0.1416 | benign | 0.219 | Stabilizing | 0.576 | D | 0.377 | neutral | N | 0.514669587 | None | None | N |
E/W | 0.9083 | likely_pathogenic | 0.8576 | pathogenic | 0.147 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
E/Y | 0.5968 | likely_pathogenic | 0.5385 | ambiguous | 0.304 | Stabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.